RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CDKN2CP42773 168 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PSMD8P48556 350 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TAS2R50P59544 299 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CDK6Q00534 326 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TEAD4Q15561 434 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PYCR3Q53H96 274 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DUS1LQ6P1R4 473 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SBSNQ6UWP8 590 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 C17orf99Q6UX52 265 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TMPRSS11AQ6ZMR5 421 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 GALNT7Q86SF2 657 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 NPAS3Q8IXF0 933 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 KRT78Q8N1N4 520 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DPP10Q8N608 796 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 C2orf15Q8WU43 125 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ING5Q8WYH8 240 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 POP5Q969H6 163 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DIRAS2Q96HU8 199 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 UHRF1Q96T88 793 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 YIPF4Q9BSR8 244 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PRRG3Q9BZD7 231 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 POLR2J2Q9GZM3 115 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 KLHL1Q9NR64 748 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DNAJC27Q9NZQ0 273 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 INTS6Q9UL03 887 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 MRPS7Q9Y2R9 242 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SAGE2PA6NJ88 616 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SNTNA6NMZ2 147 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 HNRNPCL2B2RXH8 293 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ACOX3O15254 700 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PRLP01236 227 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CYBAP13498 195 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ANXA8P13928 327 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 HOXB6P17509 224 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CD70P32970 193 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ETV3P41162 512 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 HNMTP50135 292 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CLCN7P51798 805 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 MAPK12P53778 367 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ADARB1P78563 741 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CREMQ03060 361 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TARDBPQ13148 414 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DOC2AQ14183 400 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC14A2Q15849 920 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SNAPC1Q16533 368 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 IQCCQ4KMZ1 466 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CARD16Q5EG05 197 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DCST1Q5T197 706 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 USP43Q70EL4 1123 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 METTL3Q86U44 580 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RNF130Q86XS8 419 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 AMBRA1Q9C0C7 1298 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 MTG2Q9H4K7 406 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 THG1LQ9NWX6 298 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ELOVL2Q9NXB9 296 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 MS4A12Q9NXJ0 267 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PRKAG2Q9UGJ0 569 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PIPSLA2A3N6 862 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 CCDC182A6NF36 153 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 TSPAN6O43657 245 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 DNTTP04053 509 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 C8AP07357 584 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 NUDT7P0C024 238 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 NR2F6P10588 404 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 GADD45AP24522 165 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 AP1S2P56377 157 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 MVKQ03426 396 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 IL18R1Q13478 541 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 KLHL17Q6TDP4 642 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RSPO2Q6UXX9 243 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 GDPD4Q6W3E5 623 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 Q6ZNX1 250 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 USP30Q70CQ3 517 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 LIMS2Q7Z4I7 341 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RTN4RL1Q86UN2 441 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 C17orf64Q86WR6 236 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM217AQ8IXS0 508 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RBM12BQ8IXT5 1001 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC5A8Q8N695 610 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 BPIFB1Q8TDL5 484 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 KAT2AQ92830 837 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RNFT2Q96EX2 444 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 COL21A1Q96P44 957 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC22A12Q96S37 553 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 HEPHQ9BQS7 1158 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 GORASP2Q9H8Y8 452 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM120CQ9NX05 1096 aaKnown RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF282Q9UDV7 671 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ENPP5Q9UJA9 477 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF225Q9UK10 706 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 RIMKLBQ9ULI2 386 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 PEX16Q9Y5Y5 336 aa6.64□□□□□ -1.35
SYNPO2-206ENST00000610556 IGLV3-10A0A075B6K4 115 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms