RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 H0YIG0 161 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 TAPBPO15533 448 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
HDDC2-209ENST00000609477 WDR47O94967 919 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 RBP1P09455 135 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 PRKAR1AP10644 381 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 NCF1P14598 390 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-209ENST00000609477 ITGAXP20702 1163 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 FOLR3P41439 243 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SKP1P63208 163 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 DLG1Q12959 904 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 HKDC1Q2TB90 917 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 LINC00303Q3SY05 128 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
HDDC2-209ENST00000609477 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 TIFABQ6ZNK6 161 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 LRRC70Q7Z2Q7 622 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 ASPGQ86U10 573 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-209ENST00000609477 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 TTLQ8NG68 377 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SLC39A7Q92504 469 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 EXTL1Q92935 676 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 CD244Q9BZW8 370 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 NT5DC2Q9H857 520 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SLC22A11Q9NSA0 550 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 COPG2Q9UBF2 871 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 ZFP69BQ9UJL9 534 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 TMCO1Q9UM00 188 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 KCNMB2Q9Y691 235 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 FER1L5A0AVI2 2057 aa13.6□□□□□ -0.23
HDDC2-209ENST00000609477 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 CDC14CA4D256 554 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 URADA6NGE7 173 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 EIF4E1BA6NMX2 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 MAP2K7O14733 419 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 PCDH17O14917 1159 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 CLGNO14967 610 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 OR1F1O43749 312 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 NSA2O95478 260 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 HPDP32754 393 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 BCL6P41182 706 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 SCTRP47872 440 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 AVPR1BP47901 424 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 KCNC1P48547 511 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 OCA2Q04671 838 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 PCDH1Q08174 1060 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 DSG2Q14126 1118 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 NKG7Q16617 165 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 DEFB109BQ30KR1 87 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 SOWAHCQ53LP3 525 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TMEM214Q6NUQ4 689 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 PCSK4Q6UW60 755 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 MED25Q71SY5 747 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TMEM102Q8N9M5 508 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 UBTD2Q8WUN7 234 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 GPR78Q96P69 363 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TMEM79Q9BSE2 394 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 UNKQ9C0B0 810 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 VPS11Q9H270 941 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 CLK4Q9HAZ1 481 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
HDDC2-209ENST00000609477 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
HDDC2-209ENST00000609477 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 TRIM49D1C9J1S8 452 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 KLK8O60259 260 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 CYC1P08574 325 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 MTHFD2P13995 350 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
HDDC2-209ENST00000609477 CASP2P42575 452 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 GDF5P43026 501 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 ALDH18A1P54886 795 aaKnown RBP13.58□□□□□ -0.24
HDDC2-209ENST00000609477 RRADP55042 308 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms