RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 NPIPA5E9PKD4 350 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 SEC23BQ15437 767 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 NCEH1Q6PIU2 408 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 RASGRP3Q8IV61 690 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF611Q8N823 705 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 NPIPA1Q9UND3 350 aa12.73□□□□□ -0.37
USP6NL-205ENST00000609104 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 SLC22A8Q8TCC7 542 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 BLOC1S5-TXNDC5H3BN57 136 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 SYN3O14994 580 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 DSG2Q14126 1118 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 CYP1B1Q16678 543 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 NIFKQ9BYG3 293 aaKnown RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 A8MU76 341 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 LYPLA2O95372 231 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PTPN2P17706 415 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PRAMEF14Q5SWL7 426 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PRAMEF13Q5VWM6 474 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 SLC5A7Q9GZV3 580 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TIGARQ9NQ88 270 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 LIN28AQ9H9Z2 209 aaKnown RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 APOBEC3GQ9HC16 384 aaKnown RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 DPY19L1Q2PZI1 675 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TLR6Q9Y2C9 796 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TRBC2A0A5B9 178 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TRIM64BA6NI03 449 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 MLLT10P55197 1068 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 NFATC2Q13469 925 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 HDAC2Q92769 488 aaKnown RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ALPK1Q96QP1 1244 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ZDHHC3Q9NYG2 299 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 KCNIP3Q9Y2W7 256 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 LRRC42Q9Y546 428 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 MTX2O75431 263 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 CREG1O75629 220 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 GADD45AP24522 165 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PADI2Q9Y2J8 665 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 HAS3O00219 553 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 CSF2P04141 144 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ALPPL2P10696 532 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TUBA1BP68363 451 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-205ENST00000609104 ZDHHC24Q6UX98 284 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 DNAJC27Q9NZQ0 273 aa12.72□□□□□ -0.37
USP6NL-205ENST00000609104 BCL9O00512 1426 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 MEN1O00255 615 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ACP5P13686 325 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 DGKGP49619 791 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 FRG2Q64ET8 278 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 FRG2BQ96QU4 278 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF649Q9BS31 505 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ZBTB26Q9HCK0 441 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 RCBTB2O95199 551 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 GSTT2P0CG29 244 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 BTBD16Q32M84 506 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 UAP1L1Q3KQV9 507 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 VTCN1Q7Z7D3 282 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 SUN3Q8TAQ9 357 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 FCAMRQ8WWV6 532 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 BRF2Q9HAW0 419 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 MS4A12Q9NXJ0 267 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ACTR3BQ9P1U1 418 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 WASHC1A8K0Z3 465 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 GRIA1P42261 906 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 GATAD2BQ8WXI9 593 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 PSKH2Q96QS6 385 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 GALPQ9UBC7 116 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 WDR37Q9Y2I8 494 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 LOC730098B7Z3J9 87 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 TRAPPC6AO75865 159 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 TBX18O95935 607 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 TUBB3Q13509 450 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF641Q96N77 438 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 CGREF1Q99674 301 aa12.71□□□□□ -0.37
USP6NL-205ENST00000609104 YTHDF1Q9BYJ9 559 aaKnown RBP12.71□□□□□ -0.37
USP6NL-205ENST00000609104 THUMPD1Q9NXG2 353 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms