RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 H0YIG0 161 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 TAPBPO15533 448 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
HDDC2-206ENST00000608461 WDR47O94967 919 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 RBP1P09455 135 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 PRKAR1AP10644 381 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 NCF1P14598 390 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-206ENST00000608461 ITGAXP20702 1163 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 FOLR3P41439 243 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SKP1P63208 163 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 DLG1Q12959 904 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 HKDC1Q2TB90 917 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 LINC00303Q3SY05 128 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
HDDC2-206ENST00000608461 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 TIFABQ6ZNK6 161 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 LRRC70Q7Z2Q7 622 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 ASPGQ86U10 573 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-206ENST00000608461 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 TTLQ8NG68 377 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SLC39A7Q92504 469 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 EXTL1Q92935 676 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 CD244Q9BZW8 370 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 NT5DC2Q9H857 520 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SLC22A11Q9NSA0 550 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 COPG2Q9UBF2 871 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 ZFP69BQ9UJL9 534 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 TMCO1Q9UM00 188 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 KCNMB2Q9Y691 235 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 FER1L5A0AVI2 2057 aa13.6□□□□□ -0.23
HDDC2-206ENST00000608461 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 CDC14CA4D256 554 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 URADA6NGE7 173 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 EIF4E1BA6NMX2 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 MAP2K7O14733 419 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 PCDH17O14917 1159 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 CLGNO14967 610 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 OR1F1O43749 312 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 NSA2O95478 260 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 HPDP32754 393 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 BCL6P41182 706 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 SCTRP47872 440 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 AVPR1BP47901 424 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 KCNC1P48547 511 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 OCA2Q04671 838 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 PCDH1Q08174 1060 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 DSG2Q14126 1118 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 NKG7Q16617 165 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 DEFB109BQ30KR1 87 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 SOWAHCQ53LP3 525 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TMEM214Q6NUQ4 689 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 PCSK4Q6UW60 755 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 MED25Q71SY5 747 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TMEM102Q8N9M5 508 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 UBTD2Q8WUN7 234 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 GPR78Q96P69 363 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TMEM79Q9BSE2 394 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 UNKQ9C0B0 810 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 VPS11Q9H270 941 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 CLK4Q9HAZ1 481 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
HDDC2-206ENST00000608461 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
HDDC2-206ENST00000608461 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 TRIM49D1C9J1S8 452 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 KLK8O60259 260 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 CYC1P08574 325 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 MTHFD2P13995 350 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
HDDC2-206ENST00000608461 CASP2P42575 452 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 GDF5P43026 501 aa13.58□□□□□ -0.24
HDDC2-206ENST00000608461 ALDH18A1P54886 795 aaKnown RBP13.58□□□□□ -0.24
HDDC2-206ENST00000608461 RRADP55042 308 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms