RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PGDP52209 483 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SOX8P57073 446 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 KLRB1Q12918 225 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 MUM1Q2TAK8 710 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 CRB2Q5IJ48 1285 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SLC6A19Q695T7 634 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 LRRC8EQ6NSJ5 796 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 CYS1Q717R9 158 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 MED25Q71SY5 747 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 MAATS1Q7Z4T9 603 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 CMC1Q7Z7K0 106 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 C17orf64Q86WR6 236 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 RAB43Q86YS6 212 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 GALNT16Q8N428 558 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 ANKRD53Q8N9V6 530 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 OR5T3Q8NGG3 340 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 FBF1Q8TES7 1133 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 PSMF1Q92530 271 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 COL26A1Q96A83 441 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 ESAMQ96AP7 390 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 RHBDF1Q96CC6 855 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 MMABQ96EY8 250 aaPredicted RBP10.12□□□□□ -0.79
TUBE1-210ENST00000604967 UBXN10Q96LJ8 280 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 TMEM79Q9BSE2 394 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SARGQ9BW04 601 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 TRPC4Q9UBN4 977 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 ANAPC2Q9UJX6 822 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SLC22A14Q9Y267 594 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SHANK1Q9Y566 2161 aa10.12□□□□□ -0.79
TUBE1-210ENST00000604967 SCN3AQ9NY46 2000 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 A0A1W2PQ72 361 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CLEC18AA5D8T8 446 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF860A6NHJ4 632 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF839A8K0R7 811 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 IDSB3KWA1 339 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 SGK494L7N484 410 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 URI1O94763 535 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 BMP10O95393 424 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CCDC166P0CW27 439 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 COX6A1P12074 109 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CD1DP15813 335 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 UQCRFS1P47985 274 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 AP1S2P56377 157 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 IRF9Q00978 393 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CALCOCO2Q13137 446 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 MYBPC3Q14896 1274 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 PLEKHN1Q494U1 663 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 FAAH2Q6GMR7 532 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 JMJD6Q6NYC1 403 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 PRMT9Q6P2P2 845 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CLEC18BQ6UXF7 455 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 LANCL3Q6ZV70 420 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 VN1R5Q7Z5H4 357 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 THOC6Q86W42 341 aaKnown RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 PALM2Q8IXS6 379 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 AFAP1L2Q8N4X5 818 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 MFSD9Q8NBP5 474 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CLEC18CQ8NCF0 446 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 BBOF1Q8ND07 529 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 ZCCHC10Q8TBK6 192 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 C19orf60Q96EN9 201 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 C17orf62Q9BQA9 187 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 CRB3Q9BUF7 120 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 PHACTR1Q9C0D0 580 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 TGIF2Q9GZN2 237 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 DRC3Q9H069 523 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 KLHL31Q9H511 634 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 GPR83Q9NYM4 423 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 HCN3Q9P1Z3 774 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF282Q9UDV7 671 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 C3orf18Q9UK00 162 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 NTNG1Q9Y2I2 539 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 UTP11Q9Y3A2 253 aaKnown RBP10.11□□□□□ -0.79
TUBE1-210ENST00000604967 OARD1Q9Y530 152 aa10.11□□□□□ -0.79
TUBE1-210ENST00000604967 NBPF19A0A087WUL8 3843 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 IGHV3-20A0A0C4DH32 117 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 NCF1BA6NI72 391 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 NCF1CA8MVU1 366 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 RDH16O75452 317 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 KLHL18O94889 574 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 ENO2P09104 434 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 SLC35E2BP0CK96 405 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 NCF1P14598 390 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CD22P20273 847 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 GP5P40197 560 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 SCTRP47872 440 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 RPS15AP62244 130 aaKnown RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 OLR1P78380 273 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 REEP5Q00765 189 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 POU4F1Q01851 419 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 EEF1A2Q05639 463 aaKnown RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 BMPR2Q13873 1038 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 FAM53BQ14153 422 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 USP10Q14694 798 aaKnown RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 PCOLCEQ15113 449 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 TGFBIQ15582 683 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms