RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MAD1L1Q9Y6D9 718 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 HEATR5BQ9P2D3 2071 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 DIDO1Q9BTC0 2240 aaKnown RBP12.45□□□□□ -0.42
RPS28-204ENST00000602140 ZGRF1Q86YA3 2104 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 SVILO95425 2214 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 KCNE1BA0A087WTH5 132 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 OR5H15A6NDH6 313 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 A8MUI8 341 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 IL1RNP18510 177 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 HRH2P25021 359 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 MST1P26927 711 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 MAGEA3P43357 314 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 ZNF33BQ06732 778 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 BTBD16Q32M84 506 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 TMEM207Q6UWW9 146 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 CPEB2Q7Z5Q1 589 aaKnown RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 LMNTD2Q8IXW0 634 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 OR51Q1Q8NH59 317 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 MCOLN3Q8TDD5 553 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 MS4A14Q96JA4 679 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 HCN3Q9P1Z3 774 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 COPG2Q9UBF2 871 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 TEKT2Q9UIF3 430 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
RPS28-204ENST00000602140 ADAMTS6Q9UKP5 1117 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 SH2B3Q9UQQ2 575 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 ENTPD4Q9Y227 616 aa12.44□□□□□ -0.42
RPS28-204ENST00000602140 CPAMD8Q8IZJ3 1885 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 TRGV8A0A0C4DH27 118 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 FEZF1A0PJY2 475 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 OR2W5A6NFC9 320 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 PRSS44E7EML9 344 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 SGK494L7N484 410 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 EIF3FO00303 357 aaPredicted RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 PRAMEF2O60811 474 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 UNC5CO95185 931 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 CYC1P08574 325 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 MYBL2P10244 700 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 PRF1P14222 555 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 TNFRSF8P28908 595 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 COILP38432 576 aaPredicted RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 BCL6P41182 706 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 XCR1P46094 333 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 HSP90AA5PQ58FG0 334 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 FCRLBQ6BAA4 426 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 PLAG1Q6DJT9 500 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 TMEM214Q6NUQ4 689 aaKnown RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 CCDC137Q6PK04 289 aaKnown RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 MBOAT1Q6ZNC8 495 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 RASGEF1CQ8N431 466 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 DNAJB8Q8NHS0 232 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 ZCCHC10Q8TBK6 192 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 EEF1AKMT1Q8WVE0 214 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 SIGLEC10Q96LC7 697 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 CCDC138Q96M89 665 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 NDNQ99608 321 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 FAM167BQ9BTA0 163 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 PCBD2Q9H0N5 130 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 ATG10Q9H0Y0 220 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 IARS2Q9NSE4 1012 aaKnown RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 SEC14L3Q9UDX4 400 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 C19orf25Q9UFG5 118 aaPredicted RBP12.43□□□□□ -0.42
RPS28-204ENST00000602140 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 NEU2Q9Y3R4 380 aa12.43□□□□□ -0.42
RPS28-204ENST00000602140 LCMT2O60294 686 aaKnown RBP12.42□□□□□ -0.42
RPS28-204ENST00000602140 ABCB7O75027 752 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 C8GP07360 202 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 RGS4P49798 205 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 TIAL1Q01085 375 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPS28-204ENST00000602140 PMP22Q01453 160 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 NAE1Q13564 534 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 PTK6Q13882 451 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 CYP1B1Q16678 543 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 LRRC8EQ6NSJ5 796 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 UGT3A1Q6NUS8 523 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 AGTRAPQ6RW13 159 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 ANKRD37Q7Z713 158 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 ASPGQ86U10 573 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 SLC26A11Q86WA9 606 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■■□ 25.2
RPS28-204ENST00000602140 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 CAMKVQ8NCB2 501 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 TM4SF19Q96DZ7 209 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 ZNF354BQ96LW1 612 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 KCNK13Q9HB14 408 aa12.42□□□□□ -0.42
RPS28-204ENST00000602140 PARVBQ9HBI1 364 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms