RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 TRBC2A0A5B9 178 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 PABPN1LA6NDY0 278 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 LRRC14BA6NHZ5 514 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 STK16O75716 305 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 TBX6O95947 436 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 STATHP02808 62 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 EIF2S1P05198 315 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 KLK3P07288 261 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 NUDT17P0C025 328 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 PTPN4P29074 926 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 SCTRP47872 440 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 ARSFP54793 590 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 PCDH1Q08174 1060 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 IL10RAQ13651 578 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 SETDB1Q15047 1291 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 NCF4Q15080 339 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 NKAIN1Q4KMZ8 207 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 EMBQ6PCB8 327 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 SHISA5Q8N114 240 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 MREGQ8N565 214 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 ENDOVQ8N8Q3 282 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 OR2W6PQ8NHA6 318 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 ADAMTS17Q8TE56 1095 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 EPS8L3Q8TE67 593 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 THAP11Q96EK4 314 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 MOCOSQ96EN8 888 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 EFHD1Q9BUP0 239 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 GPR87Q9BY21 358 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 NLNQ9BYT8 704 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 FAM117AQ9C073 453 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 AICDAQ9GZX7 198 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 DNAJC11Q9NVH1 559 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 GEMIN8Q9NWZ8 242 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 GPRC5BQ9NZH0 403 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 FARSAQ9Y285 508 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 KCNE2Q9Y6J6 123 aa18.58■□□□□ 0.56
SHKBP1-221ENST00000599833 SCN3AQ9NY46 2000 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 A0A1W2PPM1 405 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 SUPT3HB4E1H0 165 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 TK2O00142 265 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 SUPT3HO75486 399 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 CREG1O75629 220 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 RECKO95980 971 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 HYAL2Q12891 473 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 ATG9BQ674R7 924 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 TMEM214Q6NUQ4 689 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 TMPRSS11BQ86T26 416 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 TTC29Q8NA56 475 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 KIAA1143Q96AT1 154 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 XPR1Q9UBH6 696 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 KCND3Q9UK17 655 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 DYRK1BQ9Y463 629 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 MED13Q9UHV7 2174 aa18.57■□□□□ 0.56
SHKBP1-221ENST00000599833 SYCE1LA8MT33 242 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 ZNF891A8MT65 544 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 C1GALT1C1LP0DN25 315 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 GNAZP19086 355 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 SLCO1A2P46721 670 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 DCDP81605 110 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 CDC20Q12834 499 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 SLC9A5Q14940 896 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 FAM214AQ32MH5 1076 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 LGSNQ5TDP6 509 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 GARNL3Q5VVW2 1013 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 PRSS41Q7RTY9 318 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 LRRC70Q7Z2Q7 622 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 VN1R5Q7Z5H4 357 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 CREB3L4Q8TEY5 395 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 SLC26A1Q9H2B4 701 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 WDR70Q9NW82 654 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 IRAK4Q9NWZ3 460 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 TMEM216Q9P0N5 145 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 TBK1Q9UHD2 729 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 TCFL5Q9UL49 500 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 NUP210LQ5VU65 1888 aa18.56■□□□□ 0.56
SHKBP1-221ENST00000599833 IQANK1A0A1B0GTG1 560 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 VSTM2BA6NLU5 285 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 C4orf51C9J302 202 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 KATNA1O75449 491 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 WFS1O76024 890 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 CASP2P42575 452 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 OR1D4P47884 311 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 ALDH18A1P54886 795 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 PCBP2Q15366 365 aaKnown RBP eCLIP18.55■□□□□ 0.566e-9■■■■■ 40.7
SHKBP1-221ENST00000599833 TSNAXIP1Q2TAA8 658 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 LINC00303Q3SY05 128 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 ADNP2Q6IQ32 1131 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 OVCH1Q7RTY7 1134 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 ASPGQ86U10 573 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 AFAP1L2Q8N4X5 818 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 METTL27Q8N6F8 245 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 AMER3Q8N944 861 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 KCT2Q8NC54 265 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 ACMSDQ8TDX5 336 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 RERGQ96A58 199 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 FKBP10Q96AY3 582 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 CABS1Q96KC9 395 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 BBC3Q96PG8 261 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 SLC7A5P2Q9GIP4 190 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 EHD1Q9H4M9 534 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms