RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 PTBP2Q9UKA9 531 aaKnown RBP10.58□□□□□ -0.72
LIG1-211ENST00000596457 RUVBL1Q9Y265 456 aaKnown RBP10.58□□□□□ -0.72
LIG1-211ENST00000596457 SPTA1P02549 2419 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 A0A1B0GX78 115 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 SYCE1LA8MT33 242 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MAP2K7O14733 419 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 P2RX6O15547 441 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CREG1O75629 220 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 RFPL1O75677 317 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 C1QL1O75973 258 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MED26O95402 600 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 C1GALT1C1LP0DN25 315 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 PTPN4P29074 926 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 SLC6A12P48065 614 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CSRP3P50461 194 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 NFKB2Q00653 900 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MC1RQ01726 317 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 IFFO1Q0D2I5 559 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CDC16Q13042 620 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 NKAIN1Q4KMZ8 207 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 YOD1Q5VVQ6 348 aaPredicted RBP10.57□□□□□ -0.72
LIG1-211ENST00000596457 WDR93Q6P2C0 686 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 NXPE4Q6UWF7 544 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 FAM198BQ6UWH4 519 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 ZNF605Q86T29 641 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MFSD9Q8NBP5 474 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 PDPRQ8NCN5 879 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 ZCCHC10Q8TBK6 192 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 PROKR1Q8TCW9 393 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 EPS8L3Q8TE67 593 aaKnown RBP10.57□□□□□ -0.72
LIG1-211ENST00000596457 SLC13A3Q8WWT9 602 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CCT6BQ92526 530 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MTBPQ96DY7 904 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 MMABQ96EY8 250 aaPredicted RBP10.57□□□□□ -0.72
LIG1-211ENST00000596457 ZNF285Q96NJ3 590 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 AIF1LQ9BQI0 150 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CD244Q9BZW8 370 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 PELI2Q9HAT8 420 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 ANGPTL3Q9Y5C1 460 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 SCN3AQ9NY46 2000 aa10.57□□□□□ -0.72
LIG1-211ENST00000596457 A0A0A6YYC8 382 aaPredicted RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 A0A1W2PPM1 405 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 TRBC2A0A5B9 178 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 FITM1A5D6W6 292 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 LRRC14BA6NHZ5 514 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 C21orf140B9A014 251 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 I3L1I5 382 aaPredicted RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 TXNDC9O14530 226 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 FFAR3O14843 346 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 GPR42O15529 346 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 SMIM24O75264 130 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 IPO13O94829 963 aaKnown RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 RBP1P09455 135 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 RAB40ALP0C0E4 278 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 PYGBP11216 843 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 PIM1P11309 404 aaPredicted RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 KRT15P19012 456 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 GNAZP19086 355 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 HNF4AP41235 474 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 MAGEA12P43365 314 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 FOXL2P58012 376 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 CDC20Q12834 499 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 SLBPQ14493 270 aaKnown RBP eCLIP10.56□□□□□ -0.72
LIG1-211ENST00000596457 PDK4Q16654 411 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 NDUFA9Q16795 377 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 TSNAXIP1Q2TAA8 658 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 MUM1Q2TAK8 710 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 PRTGQ2VWP7 1150 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 XKR6Q5GH73 641 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 TECRLQ5HYJ1 363 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 CDKL4Q5MAI5 379 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 TIFABQ6ZNK6 161 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 SHISA6Q6ZSJ9 500 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 VN1R4Q7Z5H5 301 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ASPGQ86U10 573 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 PRSS58Q8IYP2 241 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 TEX9Q8N6V9 391 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 CAMKVQ8NCB2 501 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ABHD11Q8NFV4 315 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 OR4K1Q8NGD4 311 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 RHEBL1Q8TAI7 183 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 AENQ8WTP8 325 aaKnown RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 EXTL1Q92935 676 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ISL2Q96A47 359 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ZBTB9Q96C00 473 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 PHF21BQ96EK2 531 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 THAP11Q96EK4 314 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 C10orf90Q96M02 699 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 GPR78Q96P69 363 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
LIG1-211ENST00000596457 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 CAPS2Q9BXY5 557 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 GPR87Q9BY21 358 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 ZNF304Q9HCX3 659 aa10.56□□□□□ -0.72
LIG1-211ENST00000596457 XPR1Q9UBH6 696 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms