RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TSPAN17Q96FV3 270 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 MKKSQ9NPJ1 570 aaPredicted RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 ATP13A2Q9NQ11 1180 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 GPR83Q9NYM4 423 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 NPEPPSL1A6NEC2 478 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 KIF2AO00139 706 aaPredicted RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 PCDH17O14917 1159 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 KLHL41O60662 606 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 NSA2O95478 260 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 STMN1P16949 149 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 STX2P32856 288 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 GRK3P35626 688 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 GGT5P36269 586 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 SLC6A12P48065 614 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 SLC12A2P55011 1212 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 AIMP2Q13155 320 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 USP10Q14694 798 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 TSNQ15631 228 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 VWA2Q5GFL6 755 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 IGFL3Q6UXB1 125 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 OR11G2Q8NGC1 345 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 FBF1Q8TES7 1133 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 NEIL2Q969S2 332 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 ALKBH8Q96BT7 664 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 MMABQ96EY8 250 aaPredicted RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 VPS50Q96JG6 964 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 CRB3Q9BUF7 120 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 ZNF552Q9H707 407 aaPredicted RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 CAB39LQ9H9S4 337 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 C14orf105Q9NVL8 296 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 TXNDC16Q9P2K2 825 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 FBXL4Q9UKA2 621 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 MRPS2Q9Y399 296 aaKnown RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 SLC22A7Q9Y694 548 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 FLNCQ14315 2725 aa12.39□□□□□ -0.43
USE1-207ENST00000596136 RP1L1Q8IWN7 2480 aaPredicted RBP12.39□□□□□ -0.43
USE1-207ENST00000596136 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 A0A0A6YYC8 382 aaPredicted RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 A6NL46 340 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 I3L1I5 382 aaPredicted RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 DPM1O60762 260 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 CCDC166P0CW27 439 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 CD1DP15813 335 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 RAB10P61026 200 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 PWP1Q13610 501 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 CSHL1Q14406 222 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 TGFBIQ15582 683 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 GLE1Q53GS7 698 aaKnown RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 VWA5B1Q5TIE3 1220 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 ASPGQ86U10 573 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 THOC6Q86W42 341 aaKnown RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 CTAGE3PQ8IX95 158 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 AFAP1L2Q8N4X5 818 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 PPM1NQ8N819 430 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 SLC13A3Q8WWT9 602 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 PELI2Q9HAT8 420 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 TRPC4Q9UBN4 977 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 DMGDHQ9UI17 866 aaKnown RBP12.38□□□□□ -0.43
USE1-207ENST00000596136 C3orf18Q9UK00 162 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 SLC22A14Q9Y267 594 aa12.38□□□□□ -0.43
USE1-207ENST00000596136 RELNP78509 3460 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 IDSB3KWA1 339 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 MASP2O00187 686 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 PHGDHO43175 533 aaKnown RBP12.37□□□□□ -0.43
USE1-207ENST00000596136 FAM155BO75949 473 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 SORBS2O94875 1100 aaKnown RBP12.37□□□□□ -0.43
USE1-207ENST00000596136 BMP10O95393 424 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 CYC1P08574 325 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 SLC35G6P0C7Q6 338 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 AHRP35869 848 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 SCTRP47872 440 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 AVPR1BP47901 424 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 EMP2P54851 167 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 FOXK1P85037 733 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 REEP5Q00765 189 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 KCNC4Q03721 635 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 RBBP7Q16576 425 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 TUBB8Q3ZCM7 444 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 TMEM205Q6UW68 189 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 NXPE4Q6UWF7 544 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 CEP128Q6ZU80 1094 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 PRSS41Q7RTY9 318 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 ZC3H7AQ8IWR0 971 aaKnown RBP12.37□□□□□ -0.43
USE1-207ENST00000596136 TCAIMQ8N3R3 496 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms