RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RPS15AP62244 130 aaKnown RBP10.61□□□□□ -0.71
VRK3-210ENST00000596121 REEP5Q00765 189 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 MC1RQ01726 317 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 NKG7Q16617 165 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SYT16Q17RD7 645 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 FAM214AQ32MH5 1076 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TAF1BQ53T94 588 aaPredicted RBP10.61□□□□□ -0.71
VRK3-210ENST00000596121 CDKL4Q5MAI5 379 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SULT1C3Q6IMI6 304 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 BORAQ6PGQ7 559 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SLCO4C1Q6ZQN7 724 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SHISA6Q6ZSJ9 500 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 OVCH1Q7RTY7 1134 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TBC1D1Q86TI0 1168 aaPredicted RBP10.61□□□□□ -0.71
VRK3-210ENST00000596121 AMER3Q8N944 861 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 EIF1ADQ8N9N8 165 aaKnown RBP10.61□□□□□ -0.71
VRK3-210ENST00000596121 ANKRD53Q8N9V6 530 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 MFSD9Q8NBP5 474 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 KCT2Q8NC54 265 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 STAG3L4Q8TBR4 150 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 EXT2Q93063 718 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 WBP1Q96G27 269 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 CABS1Q96KC9 395 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SPSB2Q99619 263 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SARGQ9BW04 601 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TRIM55Q9BYV6 548 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 AICDAQ9GZX7 198 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 VPS11Q9H270 941 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 CD274Q9NZQ7 290 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 ZNF180Q9UJW8 692 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 RNF112Q9ULX5 631 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 PTRH2Q9Y3E5 179 aaKnown RBP10.61□□□□□ -0.71
VRK3-210ENST00000596121 KCNMB2Q9Y691 235 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 A0A0A6YYC8 382 aaPredicted RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 EXOC1LA0A1B0GW35 172 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 TRBC2A0A5B9 178 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 PABPN1LA6NDY0 278 aaKnown RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 LRRC14BA6NHZ5 514 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 VSTM2BA6NLU5 285 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 FOXO6A8MYZ6 492 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 C9J4A7 227 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 I3L1I5 382 aaPredicted RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 K7EM74 188 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 MAP2K7O14733 419 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 OR1F1O43749 312 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 DNAJB5O75953 348 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 KLHL2O95198 593 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 B3GALT4O96024 378 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 SHBGP04278 402 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 SBK3P0C264 359 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 SCTRP47872 440 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 SERPINB9P50453 376 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 POLE2P56282 527 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 VSNL1P62760 191 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 MAT1AQ00266 395 aaKnown RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 HYAL2Q12891 473 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 CHAF1BQ13112 559 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 MUM1Q2TAK8 710 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 CPZQ66K79 652 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 ADNP2Q6IQ32 1131 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 TMEM214Q6NUQ4 689 aaKnown RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 PPP1R32Q7Z5V6 425 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 ASPGQ86U10 573 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 PDSS2Q86YH6 399 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 TMEM151AQ8N4L1 468 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 AMER2Q8N7J2 671 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 OR9A4Q8NGU2 314 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 OR2Y1Q8NGV0 311 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 RERGQ96A58 199 aaPredicted RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 CATSPER2Q96P56 530 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 CD244Q9BZW8 370 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 SLC26A1Q9H2B4 701 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 PELI2Q9HAT8 420 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 ZNF304Q9HCX3 659 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 GEMIN8Q9NWZ8 242 aaKnown RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.6□□□□□ -0.71
VRK3-210ENST00000596121 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 ZNF490Q9ULM2 529 aaPredicted RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
VRK3-210ENST00000596121 V9GYY5 206 aaPredicted RBP10.6□□□□□ -0.71
VRK3-210ENST00000596121 ARGFXA6NJG6 315 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 SUPT3HB4E1H0 165 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 C4orf51C9J302 202 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 KLK8O60259 260 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 SUPT3HO75486 399 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 STK16O75716 305 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 TBX6O95947 436 aaPredicted RBP10.59□□□□□ -0.71
VRK3-210ENST00000596121 C1GALT1C1LP0DN25 315 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 CD22P20273 847 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 ATP1A4Q13733 1029 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 ACAP2Q15057 778 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 FAM83EQ2M2I3 478 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 VWA2Q5GFL6 755 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 GARNL3Q5VVW2 1013 aa10.59□□□□□ -0.71
VRK3-210ENST00000596121 VN1R5Q7Z5H4 357 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms