RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MTO1Q9Y2Z2 717 aaKnown RBP14.37□□□□□ -0.11
TRIM28-205ENST00000595028 DOCK10Q96BY6 2186 aa14.37□□□□□ -0.11
TRIM28-205ENST00000595028 IGLV3-12A0A075B6K2 115 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 PHGDHO43175 533 aaKnown RBP14.36□□□□□ -0.11
TRIM28-205ENST00000595028 FOXS1O43638 330 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 STATHP02808 62 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 NPPBP16860 134 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 CASRP41180 1078 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 BCL6P41182 706 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 CDKL1Q00532 357 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 GUCY2DQ02846 1103 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 OCA2Q04671 838 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 FAM53BQ14153 422 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 USP10Q14694 798 aaKnown RBP14.36□□□□□ -0.11
TRIM28-205ENST00000595028 TSNQ15631 228 aaKnown RBP14.36□□□□□ -0.11
TRIM28-205ENST00000595028 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
TRIM28-205ENST00000595028 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 FRA10AC1Q70Z53 315 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 AMER3Q8N944 861 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 CLEC1AQ8NC01 280 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 FDCSPQ8NFU4 85 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 ABHD11Q8NFV4 315 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 CRB3Q9BUF7 120 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 NUDT9Q9BW91 350 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 DERL2Q9GZP9 239 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 SEMA3GQ9NS98 782 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 GPR83Q9NYM4 423 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 MRPS2Q9Y399 296 aaKnown RBP14.36□□□□□ -0.11
TRIM28-205ENST00000595028 OARD1Q9Y530 152 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 PCDHGB7Q9Y5F8 929 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 HS3ST3B1Q9Y662 390 aa14.36□□□□□ -0.11
TRIM28-205ENST00000595028 A0A0A6YYC8 382 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 I3L1I5 382 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 AGPSO00116 658 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 SOCS6O14544 535 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 TUBB4AP04350 444 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 ANXA5P08758 320 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 ZGLP1P0C6A0 271 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 GRK3P35626 688 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 CCR8P51685 355 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 KLC1Q07866 573 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 NAB1Q13506 487 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 EFTUD2Q15029 972 aaKnown RBP eCLIP14.35□□□□□ -0.112e-15■■■■■ 44.3
TRIM28-205ENST00000595028 RBBP7Q16576 425 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 NDUFA9Q16795 377 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 ASPGQ86U10 573 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 PPM1NQ8N819 430 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 NOA1Q8NC60 698 aaKnown RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 MNS1Q8NEH6 495 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 FBF1Q8TES7 1133 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 SLC5A11Q8WWX8 675 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 MIEF2Q96C03 454 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 MMABQ96EY8 250 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 EGFL8Q99944 293 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 SARGQ9BW04 601 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 FAM129AQ9BZQ8 928 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 UNKQ9C0B0 810 aaKnown RBP14.35□□□□□ -0.11
TRIM28-205ENST00000595028 C14orf105Q9NVL8 296 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 TRPC4Q9UBN4 977 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 FBXL4Q9UKA2 621 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 ZNF451Q9Y4E5 1061 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 FBN2P35556 2912 aa14.35□□□□□ -0.11
TRIM28-205ENST00000595028 FEZF1A0PJY2 475 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 A6NL46 340 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 FFAR3O14843 346 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 GPR42O15529 346 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 STMN1P16949 149 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SPRP35270 261 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SLC26A3P40879 764 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 RAB10P61026 200 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SNRPNP63162 240 aaKnown RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SLMAPQ14BN4 828 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 VWA2Q5GFL6 755 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 CRYBG3Q68DQ2 2970 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 TMEM214Q6NUQ4 689 aaKnown RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 THOC6Q86W42 341 aaKnown RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 PRSS58Q8IYP2 241 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 GALNT16Q8N428 558 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 TEX19Q8NA77 164 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 MFSD9Q8NBP5 474 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 CAMKVQ8NCB2 501 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 OR4K1Q8NGD4 311 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 NEIL2Q969S2 332 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 TM4SF19Q96DZ7 209 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SPNS1Q9H2V7 528 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 MKKSQ9NPJ1 570 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 DYRK1BQ9Y463 629 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 MAP4K5Q9Y4K4 846 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 RP1L1Q8IWN7 2480 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-205ENST00000595028 CELSR2Q9HCU4 2923 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
TRIM28-205ENST00000595028 CACNA1DQ01668 2161 aa14.33□□□□□ -0.11
TRIM28-205ENST00000595028 TRBC2A0A5B9 178 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CTAGE15A4D2H0 777 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms