RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC166P0CW27 439 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 STMN1P16949 149 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 STX2P32856 288 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 SPRP35270 261 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 GMPRP36959 345 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 CCR8P51685 355 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 MEF2AQ02078 507 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 OCA2Q04671 838 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 EFTUD2Q15029 972 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 UBAP2Q5T6F2 1119 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 TMEM214Q6NUQ4 689 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 THOC6Q86W42 341 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 MFSD9Q8NBP5 474 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 MIEF2Q96C03 454 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 RHBDF1Q96CC6 855 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 MMABQ96EY8 250 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 SMAD5Q99717 465 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 EPN3Q9H201 632 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 SPNS1Q9H2V7 528 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 SEMA3GQ9NS98 782 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC22A14Q9Y267 594 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 CTAGE15A4D2H0 777 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 KIF2AO00139 706 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 IGHEP01854 428 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CTAGE8P0CG41 777 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CD1DP15813 335 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 HNMTP50135 292 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 SOX8P57073 446 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 RAB10P61026 200 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TLE1Q04724 770 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TGFBIQ15582 683 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 NDUFA9Q16795 377 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 SYT16Q17RD7 645 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 PRSS41Q7RTY9 318 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CTAGE6Q86UF2 777 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 RELL1Q8IUW5 271 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CTAGE4Q8IX94 777 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 SHISA5Q8N114 240 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TEX19Q8NA77 164 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CLEC1AQ8NC01 280 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 KCT2Q8NC54 265 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CAMKVQ8NCB2 501 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 ZNF740Q8NDX6 193 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC13A3Q8WWT9 602 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC5A11Q8WWX8 675 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TSNARE1Q96NA8 513 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 CRB3Q9BUF7 120 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TGIF2Q9GZN2 237 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 GPR83Q9NYM4 423 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TRPC4Q9UBN4 977 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 FBXL4Q9UKA2 621 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 MAP4K5Q9Y4K4 846 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 PCDHGB7Q9Y5F8 929 aa17.55■□□□□ 0.4
SHKBP1-202ENST00000593764 TRBC2A0A5B9 178 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 PRPF4O43172 522 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 GRK3P35626 688 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 GDF5P43026 501 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 NAB1Q13506 487 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 RAPSNQ13702 412 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 CSHL1Q14406 222 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 OR4D1Q15615 310 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 ATG9BQ674R7 924 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 ASPGQ86U10 573 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 KLHDC8AQ8IYD2 350 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 GALNT16Q8N428 558 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 OR11G2Q8NGC1 345 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 OR9A4Q8NGU2 314 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 MOCOSQ96EN8 888 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 EGFL8Q99944 293 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 FAM129AQ9BZQ8 928 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 ATP13A2Q9NQ11 1180 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 NINJ2Q9NZG7 142 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 C3orf18Q9UK00 162 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 ZNF451Q9Y4E5 1061 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 SCN3AQ9NY46 2000 aa17.54■□□□□ 0.4
SHKBP1-202ENST00000593764 DOCK10Q96BY6 2186 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 HMX2A2RU54 273 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 H0YIG0 161 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 TAPBPO15533 448 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 OR1F1O43749 312 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 ALOX12BO75342 701 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 NSA2O95478 260 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC35E2BP0CK96 405 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 ECHS1P30084 290 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC6A12P48065 614 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 KCNC1P48547 511 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 EFNA3P52797 238 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 ATP6V0D1P61421 351 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 MAT1AQ00266 395 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 DLG1Q12959 904 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 MYBPC3Q14896 1274 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 RBBP7Q16576 425 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 GLE1Q53GS7 698 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 NXPE4Q6UWF7 544 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 FRA10AC1Q70Z53 315 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 CMC1Q7Z7K0 106 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms