RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 AMER2Q8N7J2 671 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 SUN3Q8TAQ9 357 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 CALML6Q8TD86 181 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 MCOLN3Q8TDD5 553 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 THAP11Q96EK4 314 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 CYTH2Q99418 400 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 PCBD2Q9H0N5 130 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 STMN3Q9NZ72 180 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 COPG2Q9UBF2 871 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 C19orf25Q9UFG5 118 aaPredicted RBP22.62■■□□□ 1.21
LSM4-202ENST00000593564 ARHGAP10A1A4S6 786 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 PRSS44E7EML9 344 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 SEC24DO94855 1032 aaPredicted RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 MST1P26927 711 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 MAGEA3P43357 314 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 TBPL1P62380 186 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 ZNF33BQ06732 778 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 MINDY4Q4G0A6 757 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 SP5Q6BEB4 398 aaPredicted RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 PLAG1Q6DJT9 500 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 TMEM214Q6NUQ4 689 aaKnown RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 PRSS41Q7RTY9 318 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 OR51Q1Q8NH59 317 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 MAGOHBQ96A72 148 aaKnown RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 AARSD1Q9BTE6 412 aaKnown RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 C20orf96Q9NUD7 363 aaPredicted RBP22.61■■□□□ 1.21
LSM4-202ENST00000593564 FBXO5Q9UKT4 447 aa22.61■■□□□ 1.21
LSM4-202ENST00000593564 MYO7BQ6PIF6 2116 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 GOLGA8MH3BSY2 632 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 UNC5CO95185 931 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 PTK6Q13882 451 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 LRRC8EQ6NSJ5 796 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 TMEM207Q6UWW9 146 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 LANCL3Q6ZV70 420 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 AGGF1Q8N302 714 aaeCLIP22.6■■□□□ 1.21
LSM4-202ENST00000593564 CCDC138Q96M89 665 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 SEC14L3Q9UDX4 400 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 NEU2Q9Y3R4 380 aa22.6■■□□□ 1.21
LSM4-202ENST00000593564 IGHV3-20A0A0C4DH32 117 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 HAUS5O94927 633 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 PRF1P14222 555 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 IL1RNP18510 177 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 BCL6P41182 706 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 XCR1P46094 333 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 CSNK1G2P78368 415 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 MPP1Q00013 466 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 ART3Q13508 389 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.59■■□□□ 1.213e-9■■■□□ 17.9
LSM4-202ENST00000593564 BTBD16Q32M84 506 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 MFSD4BQ5TF39 518 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 H3F3CQ6NXT2 135 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 PCGF5Q86SE9 256 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 SRRM1Q8IYB3 904 aaKnown RBP22.59■■□□□ 1.21
LSM4-202ENST00000593564 SHISA5Q8N114 240 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 CAMKVQ8NCB2 501 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 ITLN2Q8WWU7 325 aaPredicted RBP22.59■■□□□ 1.21
LSM4-202ENST00000593564 TM4SF19Q96DZ7 209 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 FAM167BQ9BTA0 163 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 HCN3Q9P1Z3 774 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 SUCOQ9UBS9 1254 aaKnown RBP22.59■■□□□ 1.21
LSM4-202ENST00000593564 MAD1L1Q9Y6D9 718 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 APCP25054 2843 aa22.59■■□□□ 1.21
LSM4-202ENST00000593564 TRGV8A0A0C4DH27 118 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 SGK494L7N484 410 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 AGTR2P50052 363 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 ANKRD37Q7Z713 158 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 RASGEF1CQ8N431 466 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 SIGLEC10Q96LC7 697 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 ZNF354BQ96LW1 612 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 MACROD1Q9BQ69 325 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 FAM129AQ9BZQ8 928 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 ANKHQ9HCJ1 492 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 TRMT6Q9UJA5 497 aaKnown RBP22.58■■□□□ 1.21
LSM4-202ENST00000593564 ADAMTS6Q9UKP5 1117 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 SH2B3Q9UQQ2 575 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 PDE10AQ9Y233 779 aa22.58■■□□□ 1.21
LSM4-202ENST00000593564 KLF2Q9Y5W3 355 aaPredicted RBP22.58■■□□□ 1.21
LSM4-202ENST00000593564 A8MUI8 341 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 C8GP07360 202 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 COILP38432 576 aaPredicted RBP22.57■■□□□ 1.2
LSM4-202ENST00000593564 CA7P43166 264 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 SP140Q13342 867 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 CYP1B1Q16678 543 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 HSP90AA5PQ58FG0 334 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 ZNF766Q5HY98 468 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 ACER2Q5QJU3 275 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 UGT3A1Q6NUS8 523 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 AGTRAPQ6RW13 159 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 ASPGQ86U10 573 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 C17orf64Q86WR6 236 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 NAT8LQ8N9F0 302 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.57■■□□□ 1.2
LSM4-202ENST00000593564 PCDHGB6Q9Y5F9 930 aa22.57■■□□□ 1.2
LSM4-202ENST00000593564 FEZF1A0PJY2 475 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 CCND1P24385 295 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 RGS4P49798 205 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 TIAL1Q01085 375 aaKnown RBP eCLIP22.56■■□□□ 1.2
LSM4-202ENST00000593564 SRSF11Q05519 484 aaKnown RBP22.56■■□□□ 1.2
LSM4-202ENST00000593564 RBPJQ06330 500 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 NAA30Q147X3 362 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms