RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RHBDF1Q96CC6 855 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 NXNL1Q96CM4 212 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SCYL1Q96KG9 808 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 PAFAH2Q99487 392 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 DRC3Q9H069 523 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SOX17Q9H6I2 414 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 PELI2Q9HAT8 420 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 ANKHQ9HCJ1 492 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SNX15Q9NRS6 342 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 DNAJC11Q9NVH1 559 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 TRPC4Q9UBN4 977 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SH2B3Q9UQQ2 575 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 KCNMB2Q9Y691 235 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 TENM4Q6N022 2769 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 KCNE1BA0A087WTH5 132 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 A0A0A6YYC8 382 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 TRBC2A0A5B9 178 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 A6NL46 340 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 I3L1I5 382 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 LCMT2O60294 686 aaKnown RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 CCNT2O60583 730 aaKnown RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 IPO13O94829 963 aaKnown RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 C1QAP02745 245 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SLC35E2BP0CK96 405 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 GFAPP14136 432 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 GNAZP19086 355 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 CNTFP26441 200 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SLC26A3P40879 764 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 BCL6P41182 706 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 HSPA7P48741 367 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 NFATC3Q12968 1075 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 CDC16Q13042 620 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 OR4D1Q15615 310 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 RBBP7Q16576 425 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 NKG7Q16617 165 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 HIST2H2ACQ16777 129 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 C18orf21Q32NC0 220 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 MFSD4BQ5TF39 518 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 HIST2H2AA3Q6FI13 130 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 MRPL14Q6P1L8 145 aaKnown RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 PCSK4Q6UW60 755 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SHISA6Q6ZSJ9 500 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 MED25Q71SY5 747 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 KRT78Q8N1N4 520 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 TMEM102Q8N9M5 508 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 ABHD11Q8NFV4 315 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 ZCCHC10Q8TBK6 192 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SLC44A1Q8WWI5 657 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 CCT6BQ92526 530 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 NEIL2Q969S2 332 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 MVB12AQ96EY5 273 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 UBXN10Q96LJ8 280 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 OR4K3Q96R72 315 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 MACROD1Q9BQ69 325 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 CRB3Q9BUF7 120 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 ING2Q9H160 280 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SLC25A18Q9H1K4 315 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF71Q9NQZ8 489 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-227ENST00000591849 NUDT4Q9NZJ9 180 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 TUBD1Q9UJT1 453 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 ANGPTL3Q9Y5C1 460 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 SPTBP11277 2137 aa9.59□□□□□ -0.87
BRCA1-227ENST00000591849 URADA6NGE7 173 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 P2RX6O15547 441 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 NDUFS4O43181 175 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 KLF7O75840 302 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 WISP3O95389 354 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 HEXBP07686 556 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ABHD2P08910 425 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 SNRPAP09012 282 aaKnown RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 C1GALT1C1LP0DN25 315 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ECHS1P30084 290 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 GCGRP47871 477 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 GLRBP48167 497 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 SKP1P63208 163 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 IRF9Q00978 393 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 CHAF1BQ13112 559 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ATP1A4Q13733 1029 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 DSG2Q14126 1118 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 FAM53BQ14153 422 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 FBXO48Q5FWF7 155 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 XKR6Q5GH73 641 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 UBAP2Q5T6F2 1119 aaKnown RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 IRAK1BP1Q5VVH5 260 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 CLEC1AQ8NC01 280 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 TRPV3Q8NET8 790 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 OR9A4Q8NGU2 314 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 STT3BQ8TCJ2 826 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ESAMQ96AP7 390 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ABHD17AQ96GS6 310 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 C10orf90Q96M02 699 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 FUT8Q9BYC5 575 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 WDR54Q9H977 334 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 MKKSQ9NPJ1 570 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ENAMQ9NRM1 1142 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 SEMA3GQ9NS98 782 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms