RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RIPOR1Q6ZS17 1223 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 LRRC56Q8IYG6 542 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SLC34A3Q8N130 599 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 TMEM151AQ8N4L1 468 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 CSNK1A1LQ8N752 337 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 MCUQ8NE86 351 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF480Q8WV37 535 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SLX1AQ9BQ83 275 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ACAT2Q9BWD1 397 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF160Q9HCG1 818 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 MKKSQ9NPJ1 570 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 C14orf105Q9NVL8 296 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 SAMD15Q9P1V8 674 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 STOX2Q9P2F5 926 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 RUVBL1Q9Y265 456 aaKnown RBP9.88□□□□□ -0.83
VPS4B-207ENST00000591519 MED16Q9Y2X0 877 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 DHRS7Q9Y394 339 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 CENPEQ02224 2701 aa9.88□□□□□ -0.83
VPS4B-207ENST00000591519 DIDO1Q9BTC0 2240 aaKnown RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 KCNE1BA0A087WTH5 132 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 IGHV1-45A0A0A0MS14 117 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 ZCWPW2A0A1B0GU75 182 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 E5RI56 91 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 DNALI1O14645 258 aaPredicted RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 URI1O94763 535 aaPredicted RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 F7P08709 466 aaPredicted RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 MPC1LP0DKB6 136 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 ICAM2P13598 275 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 ENO3P13929 434 aaPredicted RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 HRH2P25021 359 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 CXCR2P25025 360 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TNFSF10P50591 281 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 DHX34Q14147 1143 aaKnown RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 HKDC1Q2TB90 917 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TTLL9Q3SXZ7 439 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 HP1BP3Q5SSJ5 553 aaPredicted RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF549Q6P9A3 640 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 LINC00696Q6ZRV3 163 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 LMNTD2Q8IXW0 634 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 PPIL6Q8IXY8 311 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 PRSS58Q8IYP2 241 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 BCORP1Q8N888 145 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 KCNJ9Q92806 393 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 FAM136AQ96C01 138 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 C8orf44Q96CB5 159 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 CABS1Q96KC9 395 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 IMMP1LQ96LU5 166 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 PWWP2AQ96N64 755 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 SERPINB12Q96P63 405 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 EBNA1BP2Q99848 306 aaKnown RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 RNF32Q9H0A6 362 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TRPC4Q9UBN4 977 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TAC3Q9UHF0 121 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 PCYOX1Q9UHG3 505 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 OSGIN2Q9Y236 505 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 MRPS2Q9Y399 296 aaKnown RBP9.87□□□□□ -0.83
VPS4B-207ENST00000591519 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 COMMD10Q9Y6G5 202 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 CELSR2Q9HCU4 2923 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 SVILO95425 2214 aa9.87□□□□□ -0.83
VPS4B-207ENST00000591519 TRAV17A0A0B4J275 112 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 A0A1B0GUH1 482 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 DYTNA2CJ06 578 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 H0YIG0 161 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 CCDC188H7C350 402 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 EIF3FO00303 357 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 LRRTM2O43300 516 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 ZBTB14O43829 449 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 CYC1P08574 325 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 PER3P56645 1201 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 AP2B1P63010 937 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 ARG2P78540 354 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 CTBP1Q13363 440 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 ZRSR2Q15696 482 aaKnown RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 INAQ16352 499 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 FAM180AQ6UWF9 173 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 NAT8LQ8N9F0 302 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 OR1N1Q8NGS0 311 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 GIMAP7Q8NHV1 300 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 BRIX1Q8TDN6 353 aaKnown RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 RELTQ969Z4 430 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 RERGQ96A58 199 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF669Q96BR6 464 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 MMABQ96EY8 250 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 CNDP1Q96KN2 507 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 DRC3Q9H069 523 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 DPH5Q9H2P9 285 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 XAB2Q9HCS7 855 aaKnown RBP9.86□□□□□ -0.83
VPS4B-207ENST00000591519 OLAHQ9NV23 265 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 TMEM184CQ9NVA4 438 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 RIC8BQ9NVN3 520 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 PTGFRNQ9P2B2 879 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 RNF14Q9UBS8 474 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 SNX24Q9Y343 169 aa9.86□□□□□ -0.83
VPS4B-207ENST00000591519 CRYBG3Q68DQ2 2970 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms