RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 POPDC3Q9HBV1 291 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 LRRC4CQ9HCJ2 640 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 CCDC177Q9NQR7 707 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 CUTCQ9NTM9 273 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 TXLNGQ9NUQ3 528 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 IRAK4Q9NWZ3 460 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 SNX7Q9UNH6 387 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 SH2B3Q9UQQ2 575 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 NBASA2RRP1 2371 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 H0YGG7 62 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 KIF2AO00139 706 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 HAT1O14929 419 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 ENO2P09104 434 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 EZRP15311 586 aaKnown RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 MAGEA4P43358 317 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 ARF3P61204 181 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TSTA3Q13630 321 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 PRAMEF13Q5VWM6 474 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 C3orf62Q6ZUJ4 267 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TTLL10Q6ZVT0 673 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TMEM151BQ8IW70 566 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 DTWD1Q8N5C7 304 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TTC29Q8NA56 475 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 OR56A3Q8NH54 315 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 ANKRD49Q8WVL7 239 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 FKBP10Q96AY3 582 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 FBXL8Q96CD0 374 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 GPR22Q99680 433 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 RBBP8Q99708 897 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 CPNE1Q99829 537 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TRIM55Q9BYV6 548 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 PCBD2Q9H0N5 130 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 SLC25A18Q9H1K4 315 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 SLC26A1Q9H2B4 701 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 NOVA2Q9UNW9 492 aaKnown RBP10.69□□□□□ -0.7
SMAD4-211ENST00000590499 MAN2B2Q9Y2E5 1009 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 PADI2Q9Y2J8 665 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TENM4Q6N022 2769 aa10.69□□□□□ -0.7
SMAD4-211ENST00000590499 TNRC6AQ8NDV7 1962 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 PRRC2CQ9Y520 2896 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 DOCK10Q96BY6 2186 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 HYKKA2RU49 373 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 B8ZZF3 427 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 H7BY64 318 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 M0R082 166 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 CDC7O00311 574 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 UMODP07911 640 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 SAT1P21673 171 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 CCND1P24385 295 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 HRH2P25021 359 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 GP5P40197 560 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 FOXL2P58012 376 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 POU4F1Q01851 419 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 NFATC3Q12968 1075 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 NAE1Q13564 534 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 SLC9A5Q14940 896 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ZKSCAN8Q15776 578 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 FAM214AQ32MH5 1076 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 KBTBD12Q3ZCT8 623 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 THEMIS2Q5TEJ8 643 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 MLIPQ5VWP3 458 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 CPZQ66K79 652 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 LCTLQ6UWM7 567 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 VN1R4Q7Z5H5 301 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 CCDC25Q86WR0 208 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 OR2Y1Q8NGV0 311 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ZNF417Q8TAU3 575 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 CDKL2Q92772 493 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 PRAP1Q96NZ9 151 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 OR4K3Q96R72 315 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ZNF587Q96SQ5 575 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ATG10Q9H0Y0 220 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ABCF3Q9NUQ8 709 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 TMEM184CQ9NVA4 438 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 ARL15Q9NXU5 204 aa10.68□□□□□ -0.7
SMAD4-211ENST00000590499 UTP6Q9NYH9 597 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 IFT80Q9P2H3 777 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 DMGDHQ9UI17 866 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 MTO1Q9Y2Z2 717 aaKnown RBP10.68□□□□□ -0.7
SMAD4-211ENST00000590499 MYO18BQ8IUG5 2567 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 KCNE1BA0A087WTH5 132 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 NPEPPSL1A6NEC2 478 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 TGFBR3LH3BV60 316 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 P2RX6O15547 441 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 RFPL1O75677 317 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 DNAJB5O75953 348 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 ALBP02768 609 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CD63P08962 238 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 HIST1H2AGP0C0S8 130 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-211ENST00000590499 NPPBP16860 134 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 HIST1H2ADP20671 130 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 ECHS1P30084 290 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 STX2P32856 288 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CSNK1G2P78368 415 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CDKL1Q00532 357 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 MUM1Q2TAK8 710 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 HKDC1Q2TB90 917 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 UBAP2Q5T6F2 1119 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms