RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HGFP14210 728 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ITIH1P19827 911 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 CD22P20273 847 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 GSTM2P28161 218 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 HMOX2P30519 316 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 AHRP35869 848 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 CCR10P46092 362 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 SCTRP47872 440 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 GABRA4P48169 554 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ATP1A2P50993 1020 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 MAPK10P53779 464 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ITGA1P56199 1179 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 ERVPABLB-1P60509 514 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ARF3P61204 181 aaPredicted RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
VMP1-210ENST00000589823 GGTA1PQ4G0N0 100 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ARL13AQ5H913 290 aaPredicted RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 TCTE1Q5JU00 501 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 FRMPD2BQ6IN97 320 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 LETMD1Q6P1Q0 360 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 PPP1R3BQ86XI6 285 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 BMPERQ8N8U9 685 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 TRPV3Q8NET8 790 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 OR6Y1Q8NGX8 325 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ZNF501Q96CX3 271 aaPredicted RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 OR2A5Q96R48 311 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 SHCBP1LQ9BZQ2 653 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 FBXO8Q9NRD0 319 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 AP1M2Q9Y6Q5 423 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 LOC105369274A0A096LPK9 316 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 LOC102723532A0A0G2JNH3 316 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 H0YIV9 168 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 TXNDC9O14530 226 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 UBFD1O14562 309 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 HCRTR1O43613 425 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SNRNP200O75643 2136 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 OR2B3O76000 313 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SNUPNO95149 360 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 HSPA4LO95757 839 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SERPIND1P05546 499 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ENO1P06733 434 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 SLC35G6P0C7Q6 338 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 FGF5P12034 268 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SERPINB1P30740 379 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SLC1A6P48664 564 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 CYP4F2P78329 520 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 GABREP78334 506 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 PHEXP78562 749 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 IFT88Q13099 833 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 TMEM164Q5U3C3 297 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ASPGQ86U10 573 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CUZD1Q86UP6 607 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 HOMEZQ8IX15 550 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.33
VMP1-210ENST00000589823 LAS2Q8IYD9 372 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 OR4N4Q8N0Y3 316 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ANKRD53Q8N9V6 530 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 CAMKVQ8NCB2 501 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 OR7G3Q8NG95 312 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 FAM76AQ8TAV0 307 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 METTL6Q8TCB7 284 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CCT6BQ92526 530 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SEC16BQ96JE7 1060 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 TAAR9Q96RI9 348 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 CTRCQ99895 268 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ZPBPQ9BS86 351 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SLC29A3Q9BZD2 475 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 SLC7A5P2Q9GIP4 190 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ELOVL6Q9H5J4 265 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ADGRE2Q9UHX3 823 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ZNF225Q9UK10 706 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
VMP1-210ENST00000589823 SNX6Q9UNH7 406 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 PCDHGA8Q9Y5G5 932 aa13.02□□□□□ -0.33
VMP1-210ENST00000589823 A0A1B0GTL3 188 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 FFAR3O14843 346 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 GPR42O15529 346 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 ZSCAN9O15535 394 aaPredicted RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 NDUFS4O43181 175 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 KRT6AP02538 564 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 KRT6BP04259 564 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms