RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 PDE10AQ9Y233 779 aa11.58□□□□□ -0.56
VAT1-206ENST00000589709 MRPS2Q9Y399 296 aaKnown RBP11.58□□□□□ -0.56
VAT1-206ENST00000589709 TRAV17A0A0B4J275 112 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
VAT1-206ENST00000589709 ZSCAN12O43309 604 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 WFS1O76024 890 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 AHSGP02765 367 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 C8orf89P0DMQ9 161 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 BCL6P41182 706 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 TBPL1P62380 186 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 ARG2P78540 354 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 EEF1A2Q05639 463 aaKnown RBP11.57□□□□□ -0.56
VAT1-206ENST00000589709 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
VAT1-206ENST00000589709 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 INAQ16352 499 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 SYT16Q17RD7 645 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 TMEM214Q6NUQ4 689 aaKnown RBP11.57□□□□□ -0.56
VAT1-206ENST00000589709 PAQR3Q6TCH7 311 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 FAM180AQ6UWF9 173 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 LCTLQ6UWM7 567 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 MYO1HQ8N1T3 1032 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 BCORP1Q8N888 145 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 CAMKVQ8NCB2 501 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 OR1N1Q8NGS0 311 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 OR9A4Q8NGU2 314 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 NDNQ99608 321 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 CENPEQ02224 2701 aa11.57□□□□□ -0.56
VAT1-206ENST00000589709 A1L4Q6 167 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 CLDN1O95832 211 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 TUBB4AP04350 444 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 NPPBP16860 134 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 IVDP26440 423 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 EFNA3P52797 238 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 CDKN2DP55273 166 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 AP1S2P56377 157 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 IL2P60568 153 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 MAT1AQ00266 395 aaKnown RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 NAE1Q13564 534 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 MSS51Q4VC12 460 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 ZNF324BQ6AW86 544 aaPredicted RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 FAAH2Q6GMR7 532 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 ABHD11Q8NFV4 315 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 OR4K1Q8NGD4 311 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 OR51Q1Q8NH59 317 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 METTL21AQ8WXB1 218 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 CERS2Q96G23 380 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 CYTH2Q99418 400 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 HAUS8Q9BT25 410 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 H2AFJQ9BTM1 129 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 SARGQ9BW04 601 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 VN1R1Q9GZP7 353 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 DDX47Q9H0S4 455 aaKnown RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 ATG10Q9H0Y0 220 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 OLAHQ9NV23 265 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 CORO1CQ9ULV4 474 aaPredicted RBP11.56□□□□□ -0.56
VAT1-206ENST00000589709 SLC22A7Q9Y694 548 aa11.56□□□□□ -0.56
VAT1-206ENST00000589709 KIF2AO00139 706 aaPredicted RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 LCMT2O60294 686 aaKnown RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 JRKO75564 520 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 TSPAN12O95859 305 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 CELA2AP08217 269 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 STSP08842 583 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 MYBL2P10244 700 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 ITGAMP11215 1152 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 TCP1P17987 556 aaKnown RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 IL10P22301 178 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 GRK3P35626 688 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PER3P56645 1201 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 MORF4L2Q15014 288 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PHKG1Q16816 387 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 ZXDCQ2QGD7 858 aaPredicted RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 RBM20Q5T481 1227 aaKnown RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 TEDDM1Q5T9Z0 273 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 DUPD1Q68J44 220 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PLAG1Q6DJT9 500 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 CAPN13Q6MZZ7 669 aaPredicted RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 CPEB2Q7Z5Q1 589 aaKnown RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 ASPGQ86U10 573 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 IGDCC3Q8IVU1 814 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PDIK1LQ8N165 341 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 SIRT6Q8N6T7 355 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 MFSD9Q8NBP5 474 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 OR56A3Q8NH54 315 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 SLC13A3Q8WWT9 602 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 LRRC39Q96DD0 335 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 LINGO1Q96FE5 620 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PDLIM5Q96HC4 596 aaKnown RBP11.55□□□□□ -0.56
VAT1-206ENST00000589709 TRIM54Q9BYV2 358 aa11.55□□□□□ -0.56
VAT1-206ENST00000589709 PLAC1Q9HBJ0 212 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms