RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RAB6BQ9NRW1 208 aa5.75□□□□□ -1.49
VPS25-204ENST00000589577 RAD18Q9NS91 495 aa5.75□□□□□ -1.49
VPS25-204ENST00000589577 SMARCAL1Q9NZC9 954 aa5.75□□□□□ -1.49
VPS25-204ENST00000589577 ZNF282Q9UDV7 671 aaPredicted RBP5.75□□□□□ -1.49
VPS25-204ENST00000589577 MTRF1LQ9UGC7 380 aaKnown RBP5.75□□□□□ -1.49
VPS25-204ENST00000589577 PCYOX1Q9UHG3 505 aa5.75□□□□□ -1.49
VPS25-204ENST00000589577 R3HDM2Q9Y2K5 976 aaKnown RBP5.75□□□□□ -1.49
VPS25-204ENST00000589577 HEBP2Q9Y5Z4 205 aa5.75□□□□□ -1.49
VPS25-204ENST00000589577 DSCAMO60469 2012 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TCRBV7S2A1N4TA0A589 114 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 A8MUI8 341 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 IFNA2P01563 188 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 GLI4P10075 376 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 CD46P15529 392 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TFEBP19484 476 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TACR1P25103 407 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PTPN3P26045 913 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PDHA2P29803 388 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 RFC3P40938 356 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ZFP36L2P47974 494 aaKnown RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 KCNJ1P48048 391 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 EMP2P54851 167 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 CAV1Q03135 178 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 MPP3Q13368 585 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PTK6Q13882 451 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 CAPRIN1Q14444 709 aaKnown RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 OASLQ15646 514 aaKnown RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 SLC14A2Q15849 920 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PARP6Q2NL67 630 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 BCL7AQ4VC05 210 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ANKRD20A2Q5SQ80 823 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 LDLRAP1Q5SW96 308 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ANKRD20A1Q5TYW2 823 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ANKRD20A3Q5VUR7 823 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TMEM205Q6UW68 189 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PRSS57Q6UWY2 283 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 FAM151BQ6UXP7 276 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ACAD11Q709F0 780 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 HOOK3Q86VS8 718 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 P3H2Q8IVL5 708 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 IFT20Q8IY31 132 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 MMGT1Q8N4V1 131 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 CNTD1Q8N815 330 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 RELL2Q8NC24 303 aaPredicted RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 GABPB2Q8TAK5 448 aaPredicted RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 SLCO2A1Q92959 643 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SNF8Q96H20 258 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 LINC00615Q96LM1 132 aaPredicted RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 TEKT5Q96M29 485 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SRPK1Q96SB4 655 aaKnown RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 UTP23Q9BRU9 249 aaKnown RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 C19orf24Q9BVV8 132 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 GPR63Q9BZJ6 419 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TRIM31Q9BZY9 425 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SLC6A16Q9GZN6 736 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SLC25A51Q9H1U9 297 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 LRRC40Q9H9A6 602 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 GLOD4Q9HC38 313 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 ZNF304Q9HCX3 659 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 FAM114A2Q9NRY5 505 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 PNPLA3Q9NST1 481 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 SMOXQ9NWM0 555 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 STOX2Q9P2F5 926 aaPredicted RBP5.74□□□□□ -1.49
VPS25-204ENST00000589577 FAM153AQ9UHL3 310 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 TEKT2Q9UIF3 430 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 VPS9D1Q9Y2B5 631 aa5.74□□□□□ -1.49
VPS25-204ENST00000589577 DYSFO75923 2080 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 EML6Q6ZMW3 1958 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 IGHV3-20A0A0C4DH32 117 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 MBD3L4A6NDZ8 208 aaPredicted RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 MBD3L5A6NJ08 208 aaPredicted RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 CLCA1A8K7I4 914 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 GABRR3A8MPY1 467 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 SYT5O00445 386 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 CLDN4O14493 209 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 TFECO14948 347 aaPredicted RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 RAD51CO43502 376 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 SPRY1O43609 319 aaPredicted RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 HS6ST1O60243 411 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 NRP2O60462 931 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 CDC40O60508 579 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS25-204ENST00000589577 ERLIN1O75477 346 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 SLC25A12O75746 678 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 CNOT4O95628 575 aaKnown RBP5.73□□□□□ -1.49
VPS25-204ENST00000589577 HRGP04196 525 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 APRTP07741 180 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 RHOXF2BP0C7M4 288 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 NFKB1P19838 968 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 CXCR2P25025 360 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 PSMB4P28070 264 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 UQCRC1P31930 480 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 HMGCLP35914 325 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 GRIA3P42263 894 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 OCA2Q04671 838 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 ZBTB17Q13105 803 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 CUL1Q13616 776 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 GRM7Q14831 915 aa5.73□□□□□ -1.49
VPS25-204ENST00000589577 MORF4L2Q15014 288 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms