RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 C19orf25Q9UFG5 118 aaPredicted RBP12.97□□□□□ -0.33
HDAC5-208ENST00000588419 TEKT2Q9UIF3 430 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
HDAC5-208ENST00000588419 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 FAM237BA0A1B0GVD1 139 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF860A6NHJ4 632 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 RDH16O75452 317 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ICAM2P13598 275 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ENO3P13929 434 aaPredicted RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 RPS15AP62244 130 aaKnown RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 RBPJQ06330 500 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 FAM53BQ14153 422 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF766Q5HY98 468 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF324BQ6AW86 544 aaPredicted RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 TMEM205Q6UW68 189 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 CPEB2Q7Z5Q1 589 aaKnown RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 MCEMP1Q8IX19 187 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 BEST3Q8N1M1 668 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 OR51Q1Q8NH59 317 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 CD200R1Q8TD46 325 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 KCNJ9Q92806 393 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 MOCOSQ96EN8 888 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 CCDC120Q96HB5 630 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 SERPINB12Q96P63 405 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ATG10Q9H0Y0 220 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 TSPAN10Q9H1Z9 355 aaPredicted RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 ANKHQ9HCJ1 492 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 KLHL1Q9NR64 748 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 IARS2Q9NSE4 1012 aaKnown RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.33
HDAC5-208ENST00000588419 SH2B3Q9UQQ2 575 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 CELSR2Q9HCU4 2923 aa12.96□□□□□ -0.33
HDAC5-208ENST00000588419 CENPEQ02224 2701 aa12.96□□□□□ -0.34
HDAC5-208ENST00000588419 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 CACNA1CQ13936 2221 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 A0A1W2PQ72 361 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 H0YIG0 161 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 NSA2O95478 260 aaKnown RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 MYBL2P10244 700 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 CDH1P12830 882 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 COILP38432 576 aaPredicted RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 VN1R4Q7Z5H5 301 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 MRGPRGQ86SM5 289 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 PALM2Q8IXS6 379 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 LRRC56Q8IYG6 542 aaPredicted RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ARHGEF39Q8N4T4 335 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 FBXO15Q8NCQ5 510 aaPredicted RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 TRIM58Q8NG06 486 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ITLN2Q8WWU7 325 aaPredicted RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ASB11Q8WXH4 323 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 MAGOHBQ96A72 148 aaKnown RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 XAB2Q9HCS7 855 aaKnown RBP12.95□□□□□ -0.34
HDAC5-208ENST00000588419 TMEM184CQ9NVA4 438 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ABI3Q9P2A4 366 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 ADAMTS6Q9UKP5 1117 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 MED16Q9Y2X0 877 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 DHRS7Q9Y394 339 aa12.95□□□□□ -0.34
HDAC5-208ENST00000588419 NCOA6Q14686 2063 aaPredicted RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 HAUS5O94927 633 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 SERPIND1P05546 499 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 BCL6P41182 706 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 SKIV2L2P42285 1042 aaKnown RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CASP6P55212 293 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 MEF2AQ02078 507 aaPredicted RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 OC90Q02509 493 aaPredicted RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 HSP90AA5PQ58FG0 334 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CYHR1Q6ZMK1 362 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 ASPGQ86U10 573 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 C17orf64Q86WR6 236 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CRLF3Q8IUI8 442 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 MYO1HQ8N1T3 1032 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 KCT2Q8NC54 265 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CAMKVQ8NCB2 501 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CALML6Q8TD86 181 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 RELTQ969Z4 430 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 MAGED4Q96JG8 741 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 IMMP1LQ96LU5 166 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CCDC138Q96M89 665 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 CYTH2Q99418 400 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 FAM167BQ9BTA0 163 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 AARSD1Q9BTE6 412 aaKnown RBP12.94□□□□□ -0.34
HDAC5-208ENST00000588419 RNF32Q9H0A6 362 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 RUBCNLQ9H714 662 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 FBXO5Q9UKT4 447 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 NAALAD2Q9Y3Q0 740 aa12.94□□□□□ -0.34
HDAC5-208ENST00000588419 GFYI3L273 518 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms