RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TRIM16O95361 564 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MLYCDO95822 493 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PNPP00491 289 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 IGHV4-34P06331 123 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CTSLP07711 333 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RHOXF2BP0C7M4 288 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF883P0CG24 379 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PRLRP16471 622 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 BTF3P20290 206 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CA4P22748 312 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 HSPA9P38646 679 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ARHGAP25P42331 645 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 HCAR3P49019 387 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 LMAN1P49257 510 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SUOXP51687 545 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF41P51814 821 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 THOP1P52888 689 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RWDD2BP57060 319 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SLC26A5P58743 744 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 AP1S1P61966 158 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 POLR2LP62875 67 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 AP2B1P63010 937 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 BCL2L1Q07817 233 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 OVGP1Q12889 678 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MESDQ14696 234 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PDK2Q15119 407 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 TRIP6Q15654 476 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 KYNUQ16719 465 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 KIF19Q2TAC6 998 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 HLA-BQ31612 363 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MYLK3Q32MK0 819 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF805Q5CZA5 627 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CT83Q5H943 113 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 TOR1AIP1Q5JTV8 583 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CEP78Q5JTW2 689 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PIP5KL1Q5T9C9 394 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SLC2A7Q6PXP3 512 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SLC22A25Q6T423 547 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 LAYNQ6UX15 382 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RGS9BPQ6ZS82 235 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MEPCEQ7L2J0 689 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF771Q7L3S4 317 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PARS2Q7L3T8 475 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PTAR1Q7Z6K3 402 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ADCK1Q86TW2 530 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 IQCHQ86VS3 1027 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 HORMAD1Q86X24 394 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 GATAD2AQ86YP4 633 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CCDC50Q8IVM0 306 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 C17orf53Q8N3J3 647 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 DPP10Q8N608 796 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZBTB8BQ8NAP8 495 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 IL17RDQ8NFM7 739 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 OR2I1PQ8NGU4 316 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 TBC1D15Q8TC07 691 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 STT3BQ8TCJ2 826 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PDCD6IPQ8WUM4 868 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ARRDC3Q96B67 414 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RNF125Q96EQ8 232 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PBKQ96KB5 322 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MARK4Q96L34 752 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF599Q96NL3 588 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 CSPG4P5Q96PW8 444 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RAB3IPQ96QF0 476 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 RHOXF2Q9BQY4 288 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF670Q9BS34 389 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SPXQ9BT56 116 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 THUMPD3Q9BV44 507 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MAK16Q9BXY0 300 aaKnown RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MAGEB5Q9BZ81 275 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 TRIM7Q9C029 511 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SLC39A8Q9C0K1 460 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PRSS22Q9GZN4 317 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 MMADHCQ9H3L0 296 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 LRRC19Q9H756 370 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 TCF7L2Q9NQB0 619 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 PFDN4Q9NQP4 134 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SNTG1Q9NSN8 517 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 AKAP7Q9P0M2 348 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF212Q9UDV6 495 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 SARDHQ9UL12 918 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 NEU3Q9UQ49 428 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 ADAMTS9Q9P2N4 1935 aa4.6□□□□□ -1.67
ZNF540-204ENST00000586792 LINC00854A0A1B0GVQ3 168 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 A0A1W2PQ67 120 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 MED19A0JLT2 244 aaPredicted RBP4.59□□□□□ -1.67
ZNF540-204ENST00000586792 ARHGAP10A1A4S6 786 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 LRRD1A4D1F6 860 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 CTAGE9A4FU28 777 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 HNRNPCL2B2RXH8 293 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 J3KR12 359 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 TLR4O00206 839 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 SLC16A6O15403 523 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 LATO43561 262 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 CEP104O60308 925 aa4.59□□□□□ -1.67
ZNF540-204ENST00000586792 HNRNPCL1O60812 293 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms