RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CDSNQ15517 529 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 C3AR1Q16581 482 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 BTBD16Q32M84 506 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 KIAA0930Q6ICG6 404 aaPredicted RBP13.66□□□□□ -0.22
SDF2-202ENST00000585428 TUBA3EQ6PEY2 450 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 LANCL3Q6ZV70 420 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 PRSS41Q7RTY9 318 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 VN1R4Q7Z5H5 301 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 ANKRD37Q7Z713 158 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SPPL2CQ8IUH8 684 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SPNS2Q8IVW8 549 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 BEST3Q8N1M1 668 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 M1APQ8TC57 530 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 NPAS2Q99743 824 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 TSGA10Q9BZW7 698 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
SDF2-202ENST00000585428 ZKSCAN5Q9Y2L8 839 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 DHRS7Q9Y394 339 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SVILO95425 2214 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 ADGRG4Q8IZF6 3080 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 ASPDHA6ND91 283 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 E5RI56 91 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 ZBTB14O43829 449 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 UQCRHP07919 91 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 SNRPB2P08579 225 aaKnown RBP13.65□□□□□ -0.22
SDF2-202ENST00000585428 MPC1LP0DKB6 136 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 COX6B1P14854 86 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 TPSB2P20231 275 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 BCL6P41182 706 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 KCNJ1P48048 391 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 CASP6P55212 293 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 SPINK14Q6IE38 97 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 TMEM214Q6NUQ4 689 aaKnown RBP13.65□□□□□ -0.22
SDF2-202ENST00000585428 ZNF549Q6P9A3 640 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 PRELID2Q8N945 189 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 PLPP5Q8NEB5 264 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 GIMAP7Q8NHV1 300 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 THAP11Q96EK4 314 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 SCMH1Q96GD3 660 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 GPR137Q96N19 417 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 MACROD1Q9BQ69 325 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 MMP25Q9NPA2 562 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 SH3BGRL2Q9UJC5 107 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 TINAGQ9UJW2 476 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 VPS9D1Q9Y2B5 631 aa13.65□□□□□ -0.22
SDF2-202ENST00000585428 TACC2O95359 2948 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 AKAP9Q99996 3911 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 MAGEB16A2A368 324 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 TTI1O43156 1089 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 KIF5CO60282 957 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 LCMT2O60294 686 aaKnown RBP13.64□□□□□ -0.23
SDF2-202ENST00000585428 MAN1A2O60476 641 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 STATHP02808 62 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 IMPA1P29218 277 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 MAGEA6P43360 314 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 KIR3DL1P43629 444 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 XCR1P46094 333 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 AGTR2P50052 363 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 SMSP52788 366 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 RIPPLY3P57055 190 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 RPS15AP62244 130 aaKnown RBP13.64□□□□□ -0.23
SDF2-202ENST00000585428 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 EXT1Q16394 746 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 MEP1AQ16819 746 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 KCTD19Q17RG1 926 aaPredicted RBP13.64□□□□□ -0.23
SDF2-202ENST00000585428 GSTA5Q7RTV2 222 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 ADCK2Q7Z695 626 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 CAND1Q86VP6 1230 aaKnown RBP13.64□□□□□ -0.23
SDF2-202ENST00000585428 CRLF3Q8IUI8 442 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 MCOLN3Q8TDD5 553 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 KCNJ9Q92806 393 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 CCDC138Q96M89 665 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 C19orf25Q9UFG5 118 aaPredicted RBP13.64□□□□□ -0.23
SDF2-202ENST00000585428 GUCA1BQ9UMX6 200 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 MEMO1Q9Y316 297 aa13.64□□□□□ -0.23
SDF2-202ENST00000585428 C19orf84I3L1E1 186 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 SGK494L7N484 410 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 CDK2AP1O14519 115 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 ASNA1O43681 348 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 SYF2O95926 243 aaKnown RBP13.63□□□□□ -0.23
SDF2-202ENST00000585428 ESRRAP11474 423 aaPredicted RBP13.63□□□□□ -0.23
SDF2-202ENST00000585428 ENO3P13929 434 aaPredicted RBP13.63□□□□□ -0.23
SDF2-202ENST00000585428 PAMP19021 973 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 CSNK1G2P78368 415 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 RHAGQ02094 409 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 CTBP1Q13363 440 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 CUL1Q13616 776 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 OR1C1Q15619 314 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 TTLL9Q3SXZ7 439 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 MINDY4Q4G0A6 757 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 THEMIS2Q5TEJ8 643 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 PDSS2Q86YH6 399 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 SIAH3Q8IW03 269 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms