RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ABHD11Q8NFV4 315 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 OR4K1Q8NGD4 311 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 ATL1Q8WXF7 558 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 ZNF592Q92610 1267 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 TM4SF19Q96DZ7 209 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 OR4K3Q96R72 315 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 SPSB2Q99619 263 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 SARGQ9BW04 601 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 ATP13A2Q9NQ11 1180 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 MAP10Q9P2G4 905 aa16.97■□□□□ 0.31
ERBB2-221ENST00000584888 SPENQ96T58 3664 aaKnown RBP16.96■□□□□ 0.31
ERBB2-221ENST00000584888 IGLV3-12A0A075B6K2 115 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 AGPSO00116 658 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 FOXS1O43638 330 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 KLHL41O60662 606 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 MMP11P24347 488 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 SNRPNP63162 240 aaKnown RBP16.96■□□□□ 0.31
ERBB2-221ENST00000584888 ZKSCAN8Q15776 578 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-221ENST00000584888 GRTP1Q5TC63 336 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 CAPN13Q6MZZ7 669 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-221ENST00000584888 IGFL3Q6UXB1 125 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 C17orf64Q86WR6 236 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 RELL1Q8IUW5 271 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 FBF1Q8TES7 1133 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 NACC2Q96BF6 587 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 PYCR2Q96C36 320 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 THAP11Q96EK4 314 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 MVB12AQ96EY5 273 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 HAUS8Q9BT25 410 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 DERL2Q9GZP9 239 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 CAB39LQ9H9S4 337 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 GPAMQ9HCL2 828 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 OARD1Q9Y530 152 aa16.96■□□□□ 0.31
ERBB2-221ENST00000584888 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.3
ERBB2-221ENST00000584888 NPEPPSL1A6NEC2 478 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 TXNDC9O14530 226 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 LCMT2O60294 686 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 SEMA7AO75326 666 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 FAM155BO75949 473 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 IPO13O94829 963 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 RPS15AP62244 130 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 MRPL49Q13405 166 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 NAB1Q13506 487 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 USP10Q14694 798 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 KLHDC8AQ8IYD2 350 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 METTL27Q8N6F8 245 aaPredicted RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 SNRNP40Q96DI7 357 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 FAM129AQ9BZQ8 928 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 CTSFQ9UBX1 484 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 FBXL4Q9UKA2 621 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 MAU2Q9Y6X3 613 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 SPTAN1Q13813 2472 aaKnown RBP16.95■□□□□ 0.3
ERBB2-221ENST00000584888 ICE1Q9Y2F5 2266 aa16.95■□□□□ 0.3
ERBB2-221ENST00000584888 SPTBN1Q01082 2364 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 GUCA1CO95843 209 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CDH1P12830 882 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 STX2P32856 288 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 SPRP35270 261 aaPredicted RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 SLC26A3P40879 764 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 AIMP2Q13155 320 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 FAM53BQ14153 422 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 TSNQ15631 228 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 EIF2S3LQ2VIR3 472 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 GLE1Q53GS7 698 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 ADCK2Q7Z695 626 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 ADAMTSL2Q86TH1 951 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 IQCKQ8N0W5 287 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CISD2Q8N5K1 135 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 PPM1NQ8N819 430 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 RERGQ96A58 199 aaPredicted RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 ALKBH8Q96BT7 664 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CABS1Q96KC9 395 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 ZBTB20Q9HC78 741 aaPredicted RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CTNNAL1Q9UBT7 734 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 NXT1Q9UKK6 140 aaKnown RBP16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CDC14AQ9UNH5 594 aa16.94■□□□□ 0.3
ERBB2-221ENST00000584888 CTAGE15A4D2H0 777 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 SOCS6O14544 535 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 PHGDHO43175 533 aaKnown RBP16.93■□□□□ 0.3
ERBB2-221ENST00000584888 CTAGE8P0CG41 777 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 ITGA3P26006 1051 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 ECHS1P30084 290 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 BCL6P41182 706 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 SLC12A2P55011 1212 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 DSG2Q14126 1118 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
ERBB2-221ENST00000584888 KIRREL2Q6UWL6 708 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 SHISA6Q6ZSJ9 500 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 CTAGE6Q86UF2 777 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 CTAGE4Q8IX94 777 aa16.93■□□□□ 0.3
ERBB2-221ENST00000584888 CTAGE3PQ8IX95 158 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms