RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	TXNDC16	Q9P2K2	825 aa		12.66	□□□□□ -0.38
SREBF1-223	ENST00000584760	MTO1	Q9Y2Z2	717 aa	Known RBP	12.66	□□□□□ -0.38
SREBF1-223	ENST00000584760	TXNDC9	O14530	226 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	PHGDH	O43175	533 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	FOXS1	O43638	330 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	FBL	P22087	321 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	STX2	P32856	288 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	BCL6	P41182	706 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	CCL11	P51671	97 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	PGD	P52209	483 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	CDKL1	Q00532	357 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.65	□□□□□ -0.38	5e-15	■■■■■ 30
SREBF1-223	ENST00000584760	TSN	Q15631	228 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	DCAF10	Q5QP82	559 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	SHISA6	Q6ZSJ9	500 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	ADAMTSL2	Q86TH1	951 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	MMGT1	Q8N4V1	131 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	AMER3	Q8N944	861 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	STT3B	Q8TCJ2	826 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	ZNF592	Q92610	1267 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	NACC2	Q96BF6	587 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	THAP11	Q96EK4	314 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	FER1L6-AS2	Q96M78	137 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	DERL2	Q9GZP9	239 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	DRC3	Q9H069	523 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	SOX17	Q9H6I2	414 aa	Predicted RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	ZNF282	Q9UDV7	671 aa	Predicted RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	CDC14A	Q9UNH5	594 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	MRPS2	Q9Y399	296 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	MAP4K5	Q9Y4K4	846 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	OARD1	Q9Y530	152 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	HS3ST3B1	Q9Y662	390 aa		12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	SPTBN1	Q01082	2364 aa	Known RBP	12.65	□□□□□ -0.38
SREBF1-223	ENST00000584760	NBPF19	A0A087WUL8	3843 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	FEZF1	A0PJY2	475 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	AGPS	O00116	658 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	PEX12	O00623	359 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	SOCS6	O14544	535 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	STATH	P02808	62 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	ZGLP1	P0C6A0	271 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	SLC26A3	P40879	764 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	SLC12A2	P55011	1212 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	FAM53B	Q14153	422 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	USP10	Q14694	798 aa	Known RBP	12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	CTAGE3P	Q8IX95	158 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	PPM1N	Q8N819	430 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	OR4K1	Q8NGD4	311 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	FBF1	Q8TES7	1133 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	NEIL2	Q969S2	332 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	TM4SF19	Q96DZ7	209 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	TSPAN17	Q96FV3	270 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	SARG	Q9BW04	601 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	NUDT9	Q9BW91	350 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	GPR83	Q9NYM4	423 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	CTNNAL1	Q9UBT7	734 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	DMGDH	Q9UI17	866 aa	Known RBP	12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	FBXL4	Q9UKA2	621 aa		12.64	□□□□□ -0.39
SREBF1-223	ENST00000584760	CPAMD8	Q8IZJ3	1885 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760		A0A0A6YYC8	382 aa	Predicted RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760		I3L1I5	382 aa	Predicted RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	KIF2A	O00139	706 aa	Predicted RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MASP2	O00187	686 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	FFAR3	O14843	346 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	GPR42	O15529	346 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	PRPF4	O43172	522 aa	Known RBP eCLIP	12.63	□□□□□ -0.39	4e-7	■■■■□ 20.3
SREBF1-223	ENST00000584760	LCMT2	O60294	686 aa	Known RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	FAM155B	O75949	473 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	IGHE	P01854	428 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	TUBB4A	P04350	444 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	ANXA5	P08758	320 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	STMN1	P16949	149 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	SLC6A12	P48065	614 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	HNMT	P50135	292 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	CCR8	P51685	355 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	OCA2	Q04671	838 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	KLC1	Q07866	573 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	NAB1	Q13506	487 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	VWA2	Q5GFL6	755 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	GRTP1	Q5TC63	336 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	TMEM214	Q6NUQ4	689 aa	Known RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	KIRREL2	Q6UWL6	708 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	PRSS41	Q7RTY9	318 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	ASPG	Q86U10	573 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	KLHDC8A	Q8IYD2	350 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MFSD9	Q8NBP5	474 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	CLEC1A	Q8NC01	280 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	PRR7	Q8TB68	274 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	SLC5A11	Q8WWX8	675 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MIEF2	Q96C03	454 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	RHBDF1	Q96CC6	855 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MMAB	Q96EY8	250 aa	Predicted RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	UBXN10	Q96LJ8	280 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	TSNARE1	Q96NA8	513 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	SMAD5	Q99717	465 aa	Known RBP	12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MACROD1	Q9BQ69	325 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	MESP1	Q9BRJ9	268 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	CRB3	Q9BUF7	120 aa		12.63	□□□□□ -0.39
SREBF1-223	ENST00000584760	FAM129A	Q9BZQ8	928 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms