RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ASIC3Q9UHC3 531 aa10.59□□□□□ -0.71
CCDC47-206ENST00000584112 TAC3Q9UHF0 121 aa10.59□□□□□ -0.71
CCDC47-206ENST00000584112 FBXL4Q9UKA2 621 aa10.59□□□□□ -0.71
CCDC47-206ENST00000584112 FBXO5Q9UKT4 447 aa10.59□□□□□ -0.71
CCDC47-206ENST00000584112 SNX12Q9UMY4 172 aa10.59□□□□□ -0.71
CCDC47-206ENST00000584112 LOC105369274A0A096LPK9 316 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 LOC102723532A0A0G2JNH3 316 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 VSTM2BA6NLU5 285 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 H0YGG7 62 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GFYI3L273 518 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SMAPO00193 183 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 TXNDC9O14530 226 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 TTC4O95801 387 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SLC16A8O95907 504 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SYF2O95926 243 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 EDN3P14138 238 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 PGAM1P18669 254 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 FBLP22087 321 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 RGS4P49798 205 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 KCNK10P57789 538 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 FOXL2P58012 376 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ARF3P61204 181 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 RELAQ04206 551 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 CUL1Q13616 776 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 CRYMQ14894 314 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 PRTGQ2VWP7 1150 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 HSP90AA5PQ58FG0 334 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 THEMIS2Q5TEJ8 643 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GARNL3Q5VVW2 1013 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 PRAMEF13Q5VWM6 474 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 FBXO42Q6P3S6 717 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF549Q6P9A3 640 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 MEX3BQ6ZN04 569 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 PAQR7Q86WK9 346 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 OR4N4Q8N0Y3 316 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ZADH2Q8N4Q0 377 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 METTL27Q8N6F8 245 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GIMAP7Q8NHV1 300 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 CD200R1Q8TD46 325 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GRHL3Q8TE85 626 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF480Q8WV37 535 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 RERGQ96A58 199 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 MIEF2Q96C03 454 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 MTFMTQ96DP5 389 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GPR21Q99679 349 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SLC30A3Q99726 388 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SPOCK3Q9BQ16 436 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 NAT9Q9BTE0 207 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 AARSD1Q9BTE6 412 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 CRB3Q9BUF7 120 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SOX17Q9H6I2 414 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF552Q9H707 407 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 GRPEL1Q9HAV7 217 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 TNFRSF10DQ9UBN6 386 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 SUCOQ9UBS9 1254 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF282Q9UDV7 671 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 TRMT6Q9UJA5 497 aaKnown RBP10.58□□□□□ -0.72
CCDC47-206ENST00000584112 MED16Q9Y2X0 877 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 HS3ST3B1Q9Y662 390 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 MAU2Q9Y6X3 613 aa10.58□□□□□ -0.72
CCDC47-206ENST00000584112 INAFM1C9JVW0 142 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 E7ENX8 843 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 SOCS6O14544 535 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 NRP2O60462 931 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 HAUS5O94927 633 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 TCP1P17987 556 aaKnown RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 HRH2P25021 359 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 SKIV2L2P42285 1042 aaKnown RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 MPP1Q00013 466 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 TAP2Q03519 686 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 KLC1Q07866 573 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 SPANXN3Q5MJ09 141 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 AGAP7PQ5VUJ5 663 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 ZNF425Q6IV72 752 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 KIRREL2Q6UWL6 708 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 SHISA6Q6ZSJ9 500 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 UBE2R2Q712K3 238 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 PALM2Q8IXS6 379 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 CPNE9Q8IYJ1 553 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 AGGF1Q8N302 714 aaeCLIP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 CSNK1A1LQ8N752 337 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 C2CD4AQ8NCU7 369 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 PPFIBP2Q8ND30 876 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 STT3BQ8TCJ2 826 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 MCOLN3Q8TDD5 553 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 SLCO2A1Q92959 643 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 C10orf90Q96M02 699 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 AGAP4Q96P64 663 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 PCBD2Q9H0N5 130 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 DDX47Q9H0S4 455 aaKnown RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 CCDC177Q9NQR7 707 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 IARS2Q9NSE4 1012 aaKnown RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 C14orf105Q9NVL8 296 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 PCYOX1Q9UHG3 505 aa10.57□□□□□ -0.72
CCDC47-206ENST00000584112 RUVBL1Q9Y265 456 aaKnown RBP10.57□□□□□ -0.72
CCDC47-206ENST00000584112 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms