RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 ARSFP54793 590 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 SNRPNP63162 240 aaKnown RBP20.64■□□□□ 0.89
TSEN54-208ENST00000583173 HKDC1Q2TB90 917 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 KRT71Q3SY84 523 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 TMPRSS11BQ86T26 416 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 TEX9Q8N6V9 391 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 SNX31Q8N9S9 440 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 ANKRD53Q8N9V6 530 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 C10orf90Q96M02 699 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 AIF1LQ9BQI0 150 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 PITHD1Q9GZP4 211 aaPredicted RBP20.64■□□□□ 0.89
TSEN54-208ENST00000583173 C12orf65Q9H3J6 166 aaKnown RBP20.64■□□□□ 0.89
TSEN54-208ENST00000583173 SRPK3Q9UPE1 567 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 RUVBL1Q9Y265 456 aaKnown RBP20.64■□□□□ 0.89
TSEN54-208ENST00000583173 PLLPQ9Y342 182 aa20.64■□□□□ 0.89
TSEN54-208ENST00000583173 MDC1Q14676 2089 aaKnown RBP20.64■□□□□ 0.89
TSEN54-208ENST00000583173 COPEO14579 308 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 RRP8O43159 456 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 H2AFYO75367 372 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 RPS17P08708 135 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 EPB42P16452 691 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 ATP5F1P24539 256 aaPredicted RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 EEF1DP29692 281 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 GRK3P35626 688 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 AHRP35869 848 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 PRKAA2P54646 552 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 TLE3Q04726 772 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 SRSF6Q13247 344 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 GTF2H2Q13888 395 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 FAM214AQ32MH5 1076 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 MANEAQ5SRI9 462 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 CEP85LQ5SZL2 805 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 GTF2H2CQ6P1K8 395 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 GOLGA7Q7Z5G4 137 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 CSNK1A1LQ8N752 337 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 PROKR1Q8TCW9 393 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 CREB3L4Q8TEY5 395 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 PTCD3Q96EY7 689 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 PGM2Q96G03 612 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 ZBTB26Q9HCK0 441 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 SLC22A11Q9NSA0 550 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 CUTCQ9NTM9 273 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 DHCR7Q9UBM7 475 aaKnown RBP20.63■□□□□ 0.89
TSEN54-208ENST00000583173 PCTPQ9UKL6 214 aa20.63■□□□□ 0.89
TSEN54-208ENST00000583173 TXNDC9O14530 226 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 KLK10O43240 276 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 OR1F1O43749 312 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 EIF2S1P05198 315 aaKnown RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CCNYL3P0C7X3 344 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 IMPDH1P20839 514 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 F8A1P23610 371 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CXCR2P25025 360 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 ITPKBP27987 946 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CHIT1Q13231 466 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CASP8Q14790 479 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CCDC153Q494R4 210 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 UNC50Q53HI1 259 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 GARNL3Q5VVW2 1013 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 FAM199XQ6PEV8 388 aaPredicted RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CROCCP2Q86T23 111 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 EXOC3L1Q86VI1 746 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 SRRM1Q8IYB3 904 aaKnown RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 ZNF483Q8TF39 744 aaPredicted RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 SLC13A3Q8WWT9 602 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 RERGQ96A58 199 aaPredicted RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 CLIP3Q96DZ5 547 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 MOCOSQ96EN8 888 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 MACROD1Q9BQ69 325 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 DPH2Q9BQC3 489 aaPredicted RBP20.62■□□□□ 0.89
TSEN54-208ENST00000583173 NDC1Q9BTX1 674 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 ZFP69BQ9UJL9 534 aa20.62■□□□□ 0.89
TSEN54-208ENST00000583173 OR7A17O14581 309 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 DSCR3O14972 297 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 RGS16O15492 202 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 FOXS1O43638 330 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TYROBPO43914 113 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TBX6O95947 436 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 KLK3P07288 261 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 WT1P19544 449 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TAC1P20366 129 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 ATP1A2P50993 1020 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 IRF8Q02556 426 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 HYAL2Q12891 473 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 PWP1Q13610 501 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 COL9A2Q14055 689 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 SLBPQ14493 270 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 XKR6Q5GH73 641 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 ZNF678Q5SXM1 525 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TMIGD1Q6UXZ0 262 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 ZYG11AQ6WRX3 759 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TTLL10Q6ZVT0 673 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 VN1R5Q7Z5H4 357 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 ASPGQ86U10 573 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 DTWD1Q8N5C7 304 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 L3MBTL4Q8NA19 623 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 TTC29Q8NA56 475 aaPredicted RBP20.61■□□□□ 0.89
TSEN54-208ENST00000583173 CAMKVQ8NCB2 501 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 NT5CQ8TCD5 201 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 APOPT1Q96IL0 206 aa20.61■□□□□ 0.89
TSEN54-208ENST00000583173 NSUN5Q96P11 429 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms