RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PCDH1Q08174 1060 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CEACAM7Q14002 265 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CAPRIN1Q14444 709 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 DPY19L1Q2PZI1 675 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 UAP1L1Q3KQV9 507 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 FAM174BQ3ZCQ3 159 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ZNF658BQ4V348 819 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 STPG1Q5TH74 334 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 FAM219BQ5XKK7 198 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 KIAA0895LQ68EN5 471 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CAPRIN2Q6IMN6 1127 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 NOXRED1Q6NXP6 359 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 SLC23A3Q6PIS1 610 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TMIGD1Q6UXZ0 262 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ADCK2Q7Z695 626 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 GPR180Q86V85 440 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 IFNEQ86WN2 208 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 HID1Q8IV36 788 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TRIM48Q8IWZ4 208 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.95□□□□□ -0.98
SS18-220ENST00000582092 TMEM132CQ8N3T6 1108 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CATSPER1Q8NEC5 780 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 OR7G3Q8NG95 312 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 HMGCLL1Q8TB92 370 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 SLC13A3Q8WWT9 602 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PYDC1Q8WXC3 89 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 FAM131CQ96AQ9 280 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ASB9Q96DX5 294 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TOE1Q96GM8 510 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 HSPA12BQ96MM6 686 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 QRFPRQ96P65 431 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TSSK3Q96PN8 268 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 INSM2Q96T92 566 aaPredicted RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 THUMPD3Q9BV44 507 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 ACAT2Q9BWD1 397 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 GPR174Q9BXC1 333 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TMEM181Q9P2C4 612 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 TAC3Q9UHF0 121 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PILRBQ9UKJ0 227 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 SLC6A14Q9UN76 642 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 DMTF1Q9Y222 760 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ST14Q9Y5Y6 855 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 CACNA1EQ15878 2313 aa8.95□□□□□ -0.98
SS18-220ENST00000582092 ZFC3H1O60293 1989 aaKnown RBP8.95□□□□□ -0.98
SS18-220ENST00000582092 PIPSLA2A3N6 862 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 MAGEB17A8MXT2 336 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 EVPLLA8MZ36 301 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 FOXE1O00358 373 aaPredicted RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 AKAP10O43572 662 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 SH3BGRLO75368 114 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 LRATO95237 230 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 IGLV3-19P01714 112 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 PGRP06401 933 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 CDH1P12830 882 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 COX7A2P14406 83 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 CMPK1P30085 196 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 MSX2P35548 267 aaPredicted RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 PIK3CBP42338 1070 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 RAB28P51157 221 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 DGKQP52824 942 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 EEFSECP57772 596 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 SRP54P61011 504 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 RPS13P62277 151 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 PLIN5Q00G26 463 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 LRRC74AQ0VAA2 488 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 ILF3Q12906 894 aaKnown RBP eCLIP8.94□□□□□ -0.98
SS18-220ENST00000582092 CCNIQ14094 377 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 TAF11Q15544 211 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 TEAD4Q15561 434 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 ANXA8L1Q5VT79 327 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 SLC2A7Q6PXP3 512 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 Q6ZSR6 202 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 PAGE2Q7Z2X7 111 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 R3HCC1LQ7Z5L2 792 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 PROSER1Q86XN7 944 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 DPP10Q8N608 796 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 DEFB119Q8N690 84 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 FRMD1Q8N878 549 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 GPR156Q8NFN8 814 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 TTLQ8NG68 377 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 CLHC1Q8NHS4 586 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 HUS1BQ8NHY5 278 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 WDR20Q8TBZ3 569 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 APIPQ96GX9 242 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 IL17FQ96PD4 163 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 GBP5Q96PP8 586 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 OR4K3Q96R72 315 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 PITHD1Q9GZP4 211 aaPredicted RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 VCXQ9H320 206 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 CLMPQ9H6B4 373 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 MRPS30Q9NP92 439 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 ATAD3AQ9NVI7 634 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 GULP1Q9UBP9 304 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 PCDHGB4Q9UN71 923 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 CCL27Q9Y4X3 112 aa8.94□□□□□ -0.98
SS18-220ENST00000582092 ASCC3Q8N3C0 2202 aaKnown RBP8.94□□□□□ -0.98
SS18-220ENST00000582092 CNOT1A5YKK6 2376 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms