RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PI4K2AQ9BTU6 479 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 PRDM4Q9UKN5 801 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF510Q9Y2H8 683 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 TRAV24A0A0B4J272 114 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ACOD1A6NK06 481 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 NPIPB9F8W1W9 429 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 G3V2L1 256 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 PHOX2AO14813 284 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 FOLR2P14207 255 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 CPT2P23786 658 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 CETN2P41208 172 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 RBPJQ06330 500 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 CD300CQ08708 224 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 TRA2AQ13595 282 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 TMEM266Q2M3C6 531 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 C15orf32Q32M92 178 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 CRY2Q49AN0 593 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ZFAND4Q86XD8 727 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ABHD12Q8N2K0 398 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 TCEANCQ8N8B7 351 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 XXYLT1Q8NBI6 393 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ROBO4Q8WZ75 1007 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 SPSB1Q96BD6 273 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 PDLIM5Q96HC4 596 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 LGMNQ99538 433 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 CDCA3Q99618 268 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 SLF1Q9BQI6 1058 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF577Q9BSK1 485 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 EGLN3Q9H6Z9 239 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 MTHFD2LQ9H903 347 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 WDR35Q9P2L0 1181 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 LNPEPQ9UIQ6 1025 aa2.62□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 K7EQD1 137 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 SURF4O15260 269 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 POP4O95707 220 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 SERPING1P05155 500 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ADRB2P07550 413 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 MYBL1P10243 752 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ACHEP22303 614 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 CAPGP40121 348 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 RAB28P51157 221 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 CLCN4P51793 760 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 LIMK1P53667 647 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 AIMP1Q12904 312 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ILF2Q12905 390 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF177Q13360 481 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 PRPF4BQ13523 1007 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 LACTB2Q53H82 288 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 FAM166AQ6J272 317 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 NAA16Q6N069 864 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 CYB5D1Q6P9G0 228 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 RBPMS2Q6ZRY4 209 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 FAM131BQ86XD5 332 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 RCOR2Q8IZ40 523 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 GPC2Q8N158 579 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 TDRD5Q8NAT2 981 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 KCTD6Q8NC69 237 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 HDAC11Q96DB2 347 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 PGAP3Q96FM1 320 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF558Q96NG5 402 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 BTBD9Q96Q07 612 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 NDNQ99608 321 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 PUS3Q9BZE2 481 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 XAB2Q9HCS7 855 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 HACD3Q9P035 362 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 THAP10Q9P2Z0 257 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 CTSZQ9UBR2 303 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 BAIAP2L1Q9UHR4 511 aa2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 ELF5Q9UKW6 265 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-206ENST00000581631 IGKV6D-21A0A0A0MT36 114 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 MTMR11A4FU01 709 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 URADA6NGE7 173 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 GLTPD2A6NH11 291 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 SLC1A7O00341 560 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 SNAP91O60641 907 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 IL11P20809 199 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 AADACP22760 399 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ETV5P41161 510 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ZFP36L1Q07352 338 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 SRSF9Q13242 221 aaKnown RBP eCLIP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 RALBP1Q15311 655 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 PTGISQ16647 500 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ALDH1L2Q3SY69 923 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 MFN1Q8IWA4 741 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 MAML2Q8IZL2 1156 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 GBP7Q8N8V2 638 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 OR4C15Q8NGM1 316 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 NPRL2Q8WTW4 380 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 PYCR2Q96C36 320 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF597Q96LX8 424 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 LRRC3BQ96PB8 259 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 DNAI2Q9GZS0 605 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 SDCBP2Q9H190 292 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 PARLQ9H300 379 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 RIMS4Q9H426 269 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ACTL8Q9H568 366 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 RAVER2Q9HCJ3 691 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 GPN1Q9HCN4 374 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms