RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 DUPD1Q68J44 220 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 CAPN13Q6MZZ7 669 aaPredicted RBP10.94□□□□□ -0.66
SSH2-208ENST00000579040 FAM45BPQ6NSW5 357 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 RPUSD3Q6P087 351 aaKnown RBP10.94□□□□□ -0.66
SSH2-208ENST00000579040 TMEM205Q6UW68 189 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 MBOAT1Q6ZNC8 495 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 IGDCC3Q8IVU1 814 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 CAMKVQ8NCB2 501 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 PRR7Q8TB68 274 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 FAM45AQ8TCE6 357 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 ATL1Q8WXF7 558 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 HIST1H2AHQ96KK5 128 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 CNDP1Q96KN2 507 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 HIST1H2AJQ99878 128 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 MESP1Q9BRJ9 268 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 H2AFJQ9BTM1 129 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 ZNF700Q9H0M5 742 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 MKL2Q9ULH7 1088 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 NTNG1Q9Y2I2 539 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 CSAG2Q9Y5P2 127 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 TEX264Q9Y6I9 313 aa10.94□□□□□ -0.66
SSH2-208ENST00000579040 UTP20O75691 2785 aaKnown RBP10.94□□□□□ -0.66
SSH2-208ENST00000579040 DYTNA2CJ06 578 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 CCDC188H7C350 402 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 NDC80O14777 642 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 FFAR3O14843 346 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 GPR42O15529 346 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 KLHL18O94889 574 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 ENO2P09104 434 aaPredicted RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 C8orf89P0DMQ9 161 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 CDH1P12830 882 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 ARL4CP56559 192 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 EEF1A2Q05639 463 aaKnown RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 CDC16Q13042 620 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PCOLCEQ15113 449 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 INAQ16352 499 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 HECTD2Q5U5R9 776 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 CREG2Q8IUH2 290 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 GPATCH11Q8N954 259 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 ABHD11Q8NFV4 315 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 OR9A4Q8NGU2 314 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 OR56A3Q8NH54 315 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 METTL21AQ8WXB1 218 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PSMF1Q92530 271 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 TM4SF19Q96DZ7 209 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 CFAP36Q96G28 342 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 SNF8Q96H20 258 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PDLIM5Q96HC4 596 aaKnown RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 TUBB6Q9BUF5 446 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 SARGQ9BW04 601 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 VN1R1Q9GZP7 353 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PLAC1Q9HBJ0 212 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 ARL15Q9NXU5 204 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 PLEKHB1Q9UF11 243 aaPredicted RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 CHMP2BQ9UQN3 213 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 SH2B3Q9UQQ2 575 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 VWA7Q9Y334 891 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 MRPS2Q9Y399 296 aaKnown RBP10.93□□□□□ -0.66
SSH2-208ENST00000579040 SLC22A7Q9Y694 548 aa10.93□□□□□ -0.66
SSH2-208ENST00000579040 WIPF3A6NGB9 483 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 WFS1O76024 890 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 SEC31AO94979 1220 aaKnown RBP10.92□□□□□ -0.66
SSH2-208ENST00000579040 SLC35G6P0C7Q6 338 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 NPPBP16860 134 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 IL10P22301 178 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 BCL6P41182 706 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 CCR8P51685 355 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 ITGA8P53708 1063 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 GNG11P61952 73 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 SKP1P63208 163 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 ARG2P78540 354 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 MAT1AQ00266 395 aaKnown RBP10.92□□□□□ -0.66
SSH2-208ENST00000579040 ILF2Q12905 390 aaKnown RBP10.92□□□□□ -0.66
SSH2-208ENST00000579040 FAAH2Q6GMR7 532 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 TRMT10BQ6PF06 316 aaKnown RBP10.92□□□□□ -0.66
SSH2-208ENST00000579040 FAM180AQ6UWF9 173 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 LINC00696Q6ZRV3 163 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 ASPGQ86U10 573 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 KLHL7Q8IXQ5 586 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 TBC1D19Q8N5T2 526 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 MFSD9Q8NBP5 474 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 OR4K1Q8NGD4 311 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 OR51Q1Q8NH59 317 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 BRIX1Q8TDN6 353 aaKnown RBP10.92□□□□□ -0.66
SSH2-208ENST00000579040 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 FAR1Q8WVX9 515 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 SLC13A3Q8WWT9 602 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 HAS2Q92819 552 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 FBXL8Q96CD0 374 aa10.92□□□□□ -0.66
SSH2-208ENST00000579040 IMMP1LQ96LU5 166 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms