RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 RPUSD3Q6P087 351 aaKnown RBP8.45□□□□□ -1.06
GGA3-207ENST00000578896 TMEM205Q6UW68 189 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 GFRALQ6UXV0 394 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 PDSS2Q86YH6 399 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 OR51Q1Q8NH59 317 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 EEF1AKMT1Q8WVE0 214 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 NR4A3Q92570 626 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 HAS2Q92819 552 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 MARVELD3Q96A59 401 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 MVB12AQ96EY5 273 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 SIGLEC10Q96LC7 697 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 IMMP1LQ96LU5 166 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 CYTH2Q99418 400 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 AARSD1Q9BTE6 412 aaKnown RBP8.45□□□□□ -1.06
GGA3-207ENST00000578896 HES7Q9BYE0 225 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 UNKQ9C0B0 810 aaKnown RBP8.45□□□□□ -1.06
GGA3-207ENST00000578896 TGIF2Q9GZN2 237 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ZNF700Q9H0M5 742 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 C14orf105Q9NVL8 296 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 RIC8BQ9NVN3 520 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ANKRD10Q9NXR5 420 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 STMN3Q9NZ72 180 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 FBXO5Q9UKT4 447 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 PDE10AQ9Y233 779 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 SPG11Q96JI7 2443 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 ZNF407Q9C0G0 2248 aa8.45□□□□□ -1.06
GGA3-207ENST00000578896 TACC2O95359 2948 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 ZNF839A8K0R7 811 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 PRPF4O43172 522 aaKnown RBP eCLIP8.44□□□□□ -1.06
GGA3-207ENST00000578896 RDH16O75452 317 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CDC123O75794 336 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 STSP08842 583 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 EZRP15311 586 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 GABRB3P28472 473 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 HSD17B2P37059 387 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 SKIV2L2P42285 1042 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 XCR1P46094 333 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CDKN2DP55273 166 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 OLR1P78380 273 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CCZ1BP86790 482 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CCZ1P86791 482 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 MEF2AQ02078 507 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 NAE1Q13564 534 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 FAM53BQ14153 422 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 NAA25Q14CX7 972 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 NDUFA9Q16795 377 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 ZXDCQ2QGD7 858 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 BTBD16Q32M84 506 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 HP1BP3Q5SSJ5 553 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 RBM20Q5T481 1227 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 ABHD17BQ5VST6 288 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CCDC137Q6PK04 289 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 PAQR3Q6TCH7 311 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CPEB2Q7Z5Q1 589 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 SLC26A11Q86WA9 606 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 LRRC8AQ8IWT6 810 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 NAT8LQ8N9F0 302 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 MCUQ8NE86 351 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TRIM58Q8NG06 486 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 OR5T3Q8NGG3 340 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 METTL21AQ8WXB1 218 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 KCNJ9Q92806 393 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TSLPQ969D9 159 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 MOCOSQ96EN8 888 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 PEX11GQ96HA9 241 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 NPAS2Q99743 824 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TUBB6Q9BUF5 446 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 CCDC177Q9NQR7 707 aaPredicted RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 KLHL1Q9NR64 748 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 HOMER3Q9NSC5 361 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TMEM184CQ9NVA4 438 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 UTP6Q9NYH9 597 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 COPG2Q9UBF2 871 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 TRMT6Q9UJA5 497 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 PPP2R2CQ9Y2T4 447 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 NEU2Q9Y3R4 380 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 FBN2P35556 2912 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 CSMD2Q7Z408 3487 aa8.44□□□□□ -1.06
GGA3-207ENST00000578896 INTS1Q8N201 2190 aaKnown RBP8.44□□□□□ -1.06
GGA3-207ENST00000578896 AKAP9Q99996 3911 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 A0A1W2PQ72 361 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 MAGEB16A2A368 324 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 CTAGE15A4D2H0 777 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 OR5H15A6NDH6 313 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 FAM227AF5H4B4 570 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 CCL21O00585 134 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 TXNDC9O14530 226 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 PRAMEF2O60811 474 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 PHF2O75151 1096 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 RASAL1O95294 804 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 NSA2O95478 260 aaKnown RBP8.43□□□□□ -1.06
GGA3-207ENST00000578896 SERPIND1P05546 499 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 CDH1P12830 882 aa8.43□□□□□ -1.06
GGA3-207ENST00000578896 MLNP12872 115 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms