RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GPR22Q99680 433 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 SELENOSQ9BQE4 189 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 NOVA2Q9UNW9 492 aaKnown RBP15.27■□□□□ 0.04
VAPA-204ENST00000577901 HIVEP3Q5T1R4 2406 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 OR2A25A4D2G3 310 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 CTSVO60911 334 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 ALAS2P22557 587 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 HRH2P25021 359 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 ITGA3P26006 1051 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 ZNF460Q14592 562 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 GRM7Q14831 915 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 PHKG1Q16816 387 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 YOD1Q5VVQ6 348 aaPredicted RBP15.26■□□□□ 0.03
VAPA-204ENST00000577901 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
VAPA-204ENST00000577901 CYTH2Q99418 400 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 ATG10Q9H0Y0 220 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 SLC6A20Q9NP91 592 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 AGPAT4Q9NRZ5 378 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 SLC22A11Q9NSA0 550 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 NINJ2Q9NZG7 142 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 FBXL4Q9UKA2 621 aa15.26■□□□□ 0.03
VAPA-204ENST00000577901 A0A0J9YVX5 310 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 GUCA1CO95843 209 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 RAB10P61026 200 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 TBPL1P62380 186 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 YBX1P67809 324 aaKnown RBP15.25■□□□□ 0.03
VAPA-204ENST00000577901 RELAQ04206 551 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 NAE1Q13564 534 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 FAM214AQ32MH5 1076 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 PRAMEF13Q5VWM6 474 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 CAPN13Q6MZZ7 669 aaPredicted RBP15.25■□□□□ 0.03
VAPA-204ENST00000577901 FBXO42Q6P3S6 717 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 MBOAT1Q6ZNC8 495 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 FRA10AC1Q70Z53 315 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 ADCK2Q7Z695 626 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 TTC29Q8NA56 475 aaPredicted RBP15.25■□□□□ 0.03
VAPA-204ENST00000577901 ST6GALNAC3Q8NDV1 305 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 ANKRD49Q8WVL7 239 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 NACC2Q96BF6 587 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 ZFYVE21Q9BQ24 234 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
VAPA-204ENST00000577901 CAB39LQ9H9S4 337 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 CSAG2Q9Y5P2 127 aa15.25■□□□□ 0.03
VAPA-204ENST00000577901 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 H7BY64 318 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 CDC7O00311 574 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 FAM155BO75949 473 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 ANXA5P08758 320 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 ITGAXP20702 1163 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 MMP11P24347 488 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 GCGRP47871 477 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 VSX2P58304 361 aaPredicted RBP15.24■□□□□ 0.03
VAPA-204ENST00000577901 SLMAPQ14BN4 828 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 WASHC2DQ5SRD0 308 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 ZNF425Q6IV72 752 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 SBSNQ6UWP8 590 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 TTLL10Q6ZVT0 673 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 RAPH1Q70E73 1250 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 RNF44Q7L0R7 432 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 OVCH1Q7RTY7 1134 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 ADAMTSL2Q86TH1 951 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 PAQR7Q86WK9 346 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 TICAM1Q8IUC6 712 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 PPP4R1Q8TF05 950 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 RERGQ96A58 199 aaPredicted RBP15.24■□□□□ 0.03
VAPA-204ENST00000577901 FKBP10Q96AY3 582 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 FBXL8Q96CD0 374 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 ZNF285Q96NJ3 590 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 PRAP1Q96NZ9 151 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 HAUS8Q9BT25 410 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 SGPP1Q9BX95 441 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 DERL2Q9GZP9 239 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 CDC42EP4Q9H3Q1 356 aaKnown RBP15.24■□□□□ 0.03
VAPA-204ENST00000577901 ENAMQ9NRM1 1142 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 TMEM184CQ9NVA4 438 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 OARD1Q9Y530 152 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 FER1L5A0AVI2 2057 aa15.24■□□□□ 0.03
VAPA-204ENST00000577901 PCM1Q15154 2024 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 IGKV1-8A0A0C4DH67 115 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 A0A1B0GX78 115 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 HYKKA2RU49 373 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 FITM1A5D6W6 292 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 PHGDHO43175 533 aaKnown RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 ALOX12BO75342 701 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 ACSL3O95573 720 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 EIF2S1P05198 315 aaKnown RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 RHOXF2BP0C7M4 288 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 CCDC166P0CW27 439 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 PIM1P11309 404 aaPredicted RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 EZRP15311 586 aaKnown RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 CRABP2P29373 138 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 ECHS1P30084 290 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 HNMTP50135 292 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 ATP6V0D1P61421 351 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 CDKL1Q00532 357 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 EFTUD2Q15029 972 aaKnown RBP eCLIP15.23■□□□□ 0.033e-9■■■■□ 26.5
VAPA-204ENST00000577901 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms