RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 KCNJ16Q9NPI9 418 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 SPATA7Q9P0W8 599 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 HCN3Q9P1Z3 774 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 C19orf25Q9UFG5 118 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 MRFAP1Q9Y605 127 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ABCA4P78363 2273 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 ARHGEF33A8MVX0 844 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 FOXO6A8MYZ6 492 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 H0YIG0 161 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 H7BY64 318 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 SGK494L7N484 410 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 TXNDC9O14530 226 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 NDC80O14777 642 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 HAT1O14929 419 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 CD3EAPO15446 510 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 CDC40O60508 579 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 MFAP3LO75121 409 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 SLC25A12O75746 678 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PDE9AO76083 593 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 MATN4O95460 622 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 HOXD4P09016 255 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PKMP14618 531 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 IL1RNP18510 177 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 MSX1P28360 303 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PTPN7P35236 360 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 BCL6P41182 706 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 RWDD2BP57060 319 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 TRIM14Q14142 442 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 NAA25Q14CX7 972 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 EXT1Q16394 746 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 NDUFA9Q16795 377 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 P3H1Q32P28 736 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 ANKRD20A4Q4UJ75 823 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 SFT2D3Q587I9 215 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 CTSL3PQ5NE16 218 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 TMEM211Q6ICI0 200 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PAPD4Q6PIY7 484 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 RPS19BP1Q86WX3 136 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 EID3Q8N140 333 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 KIF2BQ8N4N8 673 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 HORMAD2Q8N7B1 307 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 ASB5Q8WWX0 329 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 ALG3Q92685 438 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PRAP1Q96NZ9 151 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 ETNK1Q9HBU6 452 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 CHRAC1Q9NRG0 131 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 CATSPERZQ9NTU4 200 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 GALPQ9UBC7 116 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 GNPTGQ9UJJ9 305 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 PCDHA13Q9Y5I0 950 aa9.51□□□□□ -0.89
NPLOC4-220ENST00000576940 KPNA5O15131 536 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 HS6ST1O60243 411 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NME2P1O60361 137 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PHF2O75151 1096 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 DNAJB6O75190 326 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NIPSNAP2O75323 286 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NDUFS3O75489 264 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 CDC123O75794 336 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 FAM155BO75949 473 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 ZWINTO95229 277 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NSA2O95478 260 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 GAS8O95995 478 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 TPM3P06753 285 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 ERGP11308 486 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 DRD2P14416 443 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NME2P22392 152 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 TPP2P29144 1249 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 CHRNB4P30926 498 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 FMO4P31512 558 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 TTPAP49638 278 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 AGTR2P50052 363 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PNLIPRP1P54315 467 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 EIF3BP55884 814 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PMPCAQ10713 525 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 FOXD4Q12950 439 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 MYBPHQ13203 477 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PTK6Q13882 451 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 NSDHLQ15738 373 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 CEBPEQ15744 281 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 ACSBG2Q5FVE4 666 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PPP1R21Q6ZMI0 780 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 Q71RC1 249 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 VN1R4Q7Z5H5 301 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PRUNE1Q86TP1 453 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 VSTM4Q8IW00 320 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 SULF2Q8IWU5 870 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 SLC5A8Q8N695 610 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 CHDHQ8NE62 594 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 PLPP5Q8NEB5 264 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 MCOLN3Q8TDD5 553 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 ELP5Q8TE02 316 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 RND1Q92730 232 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 TSLPQ969D9 159 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 MRFAP1L1Q96HT8 127 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 LPAR4Q99677 370 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 OLFM1Q99784 485 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 RBCK1Q9BYM8 510 aa9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 DNAJB12Q9NXW2 375 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-220ENST00000576940 KCNN3Q9UGI6 736 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms