RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CDC20BQ86Y33 519 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 TCEANCQ8N8B7 351 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 LSMEM1Q8N8F7 131 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 GBP7Q8N8V2 638 aaPredicted RBP3.9□□□□□ -1.79
CDC27-216ENST00000574304 OR4D10Q8NGI6 311 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 SEPT1Q8WYJ6 367 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 PYCR2Q96C36 320 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 SLC25A23Q9BV35 468 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 RAB11FIP5Q9BXF6 653 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 RABEP2Q9H5N1 569 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 HACD3Q9P035 362 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.9□□□□□ -1.79
CDC27-216ENST00000574304 IL16Q14005 1332 aa3.9□□□□□ -1.79
CDC27-216ENST00000574304 TP53BP1Q12888 1972 aaPredicted RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 C17orf105B2RV13 164 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 G3V2L1 256 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CYTIPO60759 359 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 TBX10O75333 385 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 HPRP00739 348 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 DNTTP04053 509 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 F3P13726 295 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 ACAT1P24752 427 aaKnown RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 KRT20P35900 424 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 PGFP49763 221 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 COG2Q14746 738 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 RBBP7Q16576 425 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 FGD3Q5JSP0 725 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 SUSD4Q5VX71 490 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 ZNF774Q6NX45 483 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 RPUSD3Q6P087 351 aaKnown RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 CHST3Q7LGC8 479 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CPEB2Q7Z5Q1 589 aaKnown RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 ERC1Q8IUD2 1116 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CCDC60Q8IWA6 550 aaPredicted RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 C17orf47Q8NEP4 570 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 OR4C15Q8NGM1 316 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CHPT1Q8WUD6 406 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CHURC1Q8WUH1 139 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 RMDN2Q96LZ7 410 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 NAA11Q9BSU3 229 aaPredicted RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 GTPBP2Q9BX10 602 aaKnown RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 DNAI2Q9GZS0 605 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 SNX25Q9H3E2 840 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 RIMS4Q9H426 269 aaPredicted RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 RNF121Q9H920 327 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 CCDC177Q9NQR7 707 aaPredicted RBP3.89□□□□□ -1.79
CDC27-216ENST00000574304 SLC7A10Q9NS82 523 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 PKD2L2Q9NZM6 624 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 IL36AQ9UHA7 158 aa3.89□□□□□ -1.79
CDC27-216ENST00000574304 TDRD15B5MCY1 1934 aaKnown RBP3.88□□□□□ -1.79
CDC27-216ENST00000574304 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.88□□□□□ -1.79
CDC27-216ENST00000574304 A8MXK9 166 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 K7EQD1 137 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 STAG3L1P0CL83 205 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 MYOGP15173 224 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 EPORP19235 508 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 BDNFP23560 247 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 CDC25CP30307 473 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 KRT2P35908 639 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 RGS19P49795 217 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 OR1D5P58170 312 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 RIGQ13278 110 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 ZNF177Q13360 481 aaPredicted RBP3.88□□□□□ -1.79
CDC27-216ENST00000574304 KRBOX4Q5JUW0 171 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 SUSD1Q6UWL2 747 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 CLEC4GQ6UXB4 293 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 PPP1R21Q6ZMI0 780 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 ANKRD33Q7Z3H0 272 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 AMIGO1Q86WK6 493 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 CCDC63Q8NA47 563 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 VPS33AQ96AX1 596 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 TMX4Q9H1E5 349 aaPredicted RBP3.88□□□□□ -1.79
CDC27-216ENST00000574304 PARLQ9H300 379 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 ST6GALNAC4Q9H4F1 302 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 CCL27Q9Y4X3 112 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
CDC27-216ENST00000574304 IGHV4-30-2A0A087WSY4 118 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 A0A1W2PPW3 197 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 FIBPO43427 364 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 SRSF10O75494 262 aaKnown RBP3.87□□□□□ -1.79
CDC27-216ENST00000574304 LUC7L3O95232 432 aaKnown RBP3.87□□□□□ -1.79
CDC27-216ENST00000574304 CCDC175P0C221 793 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 CD59P13987 128 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 OXTRP30559 389 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 HOXC13P31276 330 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 CAPGP40121 348 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 PTGER3P43115 390 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 NOVP48745 357 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 CSRP3P50461 194 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 ATP1A1-AS1Q5TC04 95 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 PRSS55Q6UWB4 352 aaPredicted RBP3.87□□□□□ -1.79
CDC27-216ENST00000574304 C3P1Q6ZMU1 363 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 ABHD12Q8N2K0 398 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 OR10G7Q8NGN6 311 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 P2RX5Q93086 422 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 KATNB1Q9BVA0 655 aa3.87□□□□□ -1.79
CDC27-216ENST00000574304 GPN1Q9HCN4 374 aaPredicted RBP3.87□□□□□ -1.79
CDC27-216ENST00000574304 CTSZQ9UBR2 303 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms