RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RERGQ96A58 199 aaPredicted RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 SCYL1Q96KG9 808 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 C10orf90Q96M02 699 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 GBP5Q96PP8 586 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 CUTCQ9NTM9 273 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 DNAJC11Q9NVH1 559 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 CPSF2Q9P2I0 782 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 NDOR1Q9UHB4 597 aa15.09■□□□□ 0.01
CHD3-215ENST00000572750 PTBP2Q9UKA9 531 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 RUVBL1Q9Y265 456 aaKnown RBP15.09■□□□□ 0.01
CHD3-215ENST00000572750 A0A1B0GX78 115 aa15.08■□□□□ 0
CHD3-215ENST00000572750 FITM1A5D6W6 292 aa15.08■□□□□ 0
CHD3-215ENST00000572750 CCNT2O60583 730 aaKnown RBP15.08■□□□□ 0
CHD3-215ENST00000572750 STK16O75716 305 aa15.08■□□□□ 0
CHD3-215ENST00000572750 KLK3P07288 261 aaPredicted RBP15.08■□□□□ 0
CHD3-215ENST00000572750 NUDT17P0C025 328 aa15.08■□□□□ 0
CHD3-215ENST00000572750 TCN2P20062 427 aa15.08■□□□□ 0
CHD3-215ENST00000572750 ITGAXP20702 1163 aa15.08■□□□□ 0
CHD3-215ENST00000572750 VARSP26640 1264 aaKnown RBP15.08■□□□□ 0
CHD3-215ENST00000572750 RPS18P62269 152 aaKnown RBP15.08■□□□□ 0
CHD3-215ENST00000572750 NFKB2Q00653 900 aa15.08■□□□□ 0
CHD3-215ENST00000572750 REEP5Q00765 189 aa15.08■□□□□ 0
CHD3-215ENST00000572750 VAC14Q08AM6 782 aa15.08■□□□□ 0
CHD3-215ENST00000572750 LY6DQ14210 128 aa15.08■□□□□ 0
CHD3-215ENST00000572750 PFKFB4Q16877 469 aa15.08■□□□□ 0
CHD3-215ENST00000572750 PRTGQ2VWP7 1150 aa15.08■□□□□ 0
CHD3-215ENST00000572750 FAM69BQ5VUD6 431 aa15.08■□□□□ 0
CHD3-215ENST00000572750 ZNF517Q6ZMY9 492 aaPredicted RBP15.08■□□□□ 0
CHD3-215ENST00000572750 TDRPQ86YL5 185 aa15.08■□□□□ 0
CHD3-215ENST00000572750 CYP4X1Q8N118 509 aa15.08■□□□□ 0
CHD3-215ENST00000572750 ZNF740Q8NDX6 193 aa15.08■□□□□ 0
CHD3-215ENST00000572750 PROKR1Q8TCW9 393 aa15.08■□□□□ 0
CHD3-215ENST00000572750 UBTD2Q8WUN7 234 aa15.08■□□□□ 0
CHD3-215ENST00000572750 STARD8Q92502 1023 aa15.08■□□□□ 0
CHD3-215ENST00000572750 CABS1Q96KC9 395 aa15.08■□□□□ 0
CHD3-215ENST00000572750 MACROD1Q9BQ69 325 aa15.08■□□□□ 0
CHD3-215ENST00000572750 PELI2Q9HAT8 420 aa15.08■□□□□ 0
CHD3-215ENST00000572750 KCNE2Q9Y6J6 123 aa15.08■□□□□ 0
CHD3-215ENST00000572750 LRRK2Q5S007 2527 aa15.08■□□□□ 0
CHD3-215ENST00000572750 DOPEY2Q9Y3R5 2298 aa15.08■□□□□ 0
CHD3-215ENST00000572750 A0A1W2PPM1 405 aa15.07■□□□□ 0
CHD3-215ENST00000572750 CCDC189A1A4V9 331 aa15.07■□□□□ 0
CHD3-215ENST00000572750 HYKKA2RU49 373 aa15.07■□□□□ 0
CHD3-215ENST00000572750 LRRC14BA6NHZ5 514 aa15.07■□□□□ 0
CHD3-215ENST00000572750 K7ENP7 123 aa15.07■□□□□ 0
CHD3-215ENST00000572750 ERVH48-1M5A8F1 160 aa15.07■□□□□ 0
CHD3-215ENST00000572750 DSCR3O14972 297 aa15.07■□□□□ 0
CHD3-215ENST00000572750 LCMT2O60294 686 aaKnown RBP15.07■□□□□ 0
CHD3-215ENST00000572750 KATNA1O75449 491 aa15.07■□□□□ 0
CHD3-215ENST00000572750 PYGBP11216 843 aa15.07■□□□□ 0
CHD3-215ENST00000572750 COL6A2P12110 1019 aa15.07■□□□□ 0
CHD3-215ENST00000572750 GNAZP19086 355 aa15.07■□□□□ 0
CHD3-215ENST00000572750 EPORP19235 508 aa15.07■□□□□ 0
CHD3-215ENST00000572750 ALAS2P22557 587 aa15.07■□□□□ 0
CHD3-215ENST00000572750 GRK3P35626 688 aa15.07■□□□□ 0
CHD3-215ENST00000572750 CYP4F2P78329 520 aa15.07■□□□□ 0
CHD3-215ENST00000572750 RELAQ04206 551 aa15.07■□□□□ 0
CHD3-215ENST00000572750 SETDB1Q15047 1291 aa15.07■□□□□ 0
CHD3-215ENST00000572750 PDK4Q16654 411 aa15.07■□□□□ 0
CHD3-215ENST00000572750 INO80CQ6PI98 192 aaPredicted RBP15.07■□□□□ 0
CHD3-215ENST00000572750 NXPE4Q6UWF7 544 aa15.07■□□□□ 0
CHD3-215ENST00000572750 LRRC70Q7Z2Q7 622 aa15.07■□□□□ 0
CHD3-215ENST00000572750 OR4K1Q8NGD4 311 aa15.07■□□□□ 0
CHD3-215ENST00000572750 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.07■□□□□ 0
CHD3-215ENST00000572750 CD244Q9BZW8 370 aa15.07■□□□□ 0
CHD3-215ENST00000572750 ACTL8Q9H568 366 aa15.07■□□□□ 0
CHD3-215ENST00000572750 PPCSQ9HAB8 311 aa15.07■□□□□ 0
CHD3-215ENST00000572750 ENAMQ9NRM1 1142 aa15.07■□□□□ 0
CHD3-215ENST00000572750 TRBC2A0A5B9 178 aa15.06■□□□□ 0
CHD3-215ENST00000572750 C21orf140B9A014 251 aa15.06■□□□□ 0
CHD3-215ENST00000572750 MAP2K7O14733 419 aa15.06■□□□□ 0
CHD3-215ENST00000572750 NDUFS4O43181 175 aa15.06■□□□□ 0
CHD3-215ENST00000572750 OR1F1O43749 312 aa15.06■□□□□ 0
CHD3-215ENST00000572750 CDH16O75309 829 aa15.06■□□□□ 0
CHD3-215ENST00000572750 CAPN1P07384 714 aa15.06■□□□□ 0
CHD3-215ENST00000572750 RBP1P09455 135 aa15.06■□□□□ 0
CHD3-215ENST00000572750 PRKAR1AP10644 381 aa15.06■□□□□ 0
CHD3-215ENST00000572750 KRT15P19012 456 aa15.06■□□□□ 0
CHD3-215ENST00000572750 AGXTP21549 392 aa15.06■□□□□ 0
CHD3-215ENST00000572750 ARSFP54793 590 aa15.06■□□□□ 0
CHD3-215ENST00000572750 ALDH18A1P54886 795 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 SNRPNP63162 240 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 IFFO1Q0D2I5 559 aa15.06■□□□□ 0
CHD3-215ENST00000572750 SLBPQ14493 270 aaKnown RBP eCLIP15.06■□□□□ 0
CHD3-215ENST00000572750 NCF4Q15080 339 aa15.06■□□□□ 0
CHD3-215ENST00000572750 COLEC12Q5KU26 742 aa15.06■□□□□ 0
CHD3-215ENST00000572750 ATP1A1-AS1Q5TC04 95 aa15.06■□□□□ 0
CHD3-215ENST00000572750 YOD1Q5VVQ6 348 aaPredicted RBP15.06■□□□□ 0
CHD3-215ENST00000572750 SLCO4C1Q6ZQN7 724 aa15.06■□□□□ 0
CHD3-215ENST00000572750 ASPGQ86U10 573 aa15.06■□□□□ 0
CHD3-215ENST00000572750 MREGQ8N565 214 aa15.06■□□□□ 0
CHD3-215ENST00000572750 PTGR2Q8N8N7 351 aaPredicted RBP15.06■□□□□ 0
CHD3-215ENST00000572750 ENDOVQ8N8Q3 282 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 MFSD9Q8NBP5 474 aa15.06■□□□□ 0
CHD3-215ENST00000572750 SLC45A3Q96JT2 553 aa15.06■□□□□ 0
CHD3-215ENST00000572750 DPH2Q9BQC3 489 aaPredicted RBP15.06■□□□□ 0
CHD3-215ENST00000572750 AIF1LQ9BQI0 150 aa15.06■□□□□ 0
CHD3-215ENST00000572750 MRPL46Q9H2W6 279 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 RRAGDQ9NQL2 400 aaPredicted RBP15.06■□□□□ 0
CHD3-215ENST00000572750 GPRC5BQ9NZH0 403 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms