RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SLC22A14Q9Y267 594 aa12.76□□□□□ -0.37
RPAIN-207ENST00000570883 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 A0A0A6YYC8 382 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 I3L1I5 382 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 TAPBPO15533 448 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SFTPCP11686 197 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 NR1D1P20393 614 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 FBLP22087 321 aaKnown RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 CRABP2P29373 138 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 GDF5P43026 501 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 HNMTP50135 292 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 REEP5Q00765 189 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 C19orf57Q0VDD7 668 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 DSG2Q14126 1118 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SSPNQ14714 243 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 GARNL3Q5VVW2 1013 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 RAPH1Q70E73 1250 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 PRSS41Q7RTY9 318 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 ISCA2Q86U28 154 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 GPSM1Q86YR5 675 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SHISA5Q8N114 240 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 MFSD9Q8NBP5 474 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 PDPRQ8NCN5 879 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 C9orf43Q8TAL5 461 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 COL26A1Q96A83 441 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 THAP11Q96EK4 314 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 MOCOSQ96EN8 888 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 MVB12AQ96EY5 273 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 MESP1Q9BRJ9 268 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SARGQ9BW04 601 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 DRC3Q9H069 523 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 ING2Q9H160 280 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SOX17Q9H6I2 414 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-207ENST00000570883 ALG9Q9H6U8 611 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 SNX15Q9NRS6 342 aa12.75□□□□□ -0.37
RPAIN-207ENST00000570883 IGLV3-12A0A075B6K2 115 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TRBC2A0A5B9 178 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 MASP2O00187 686 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TXNDC9O14530 226 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 WDR47O94967 919 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 PDGFAP04085 211 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 C2P06681 752 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 CD63P08962 238 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 FAM153BP0C7A2 387 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TFEBP19484 476 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 SLC26A3P40879 764 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 FAM153CQ494X1 144 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TMEM214Q6NUQ4 689 aaKnown RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TMPRSS11BQ86T26 416 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TBC1D1Q86TI0 1168 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ASPGQ86U10 573 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 IFT20Q8IY31 132 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 KCT2Q8NC54 265 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ZCCHC10Q8TBK6 192 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 KCTD4Q8WVF5 259 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 EXT2Q93063 718 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ESAMQ96AP7 390 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ATOH8Q96SQ7 321 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 PAFAH2Q99487 392 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 PELI2Q9HAT8 420 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ZNF71Q9NQZ8 489 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 NXT1Q9UKK6 140 aaKnown RBP12.74□□□□□ -0.37
RPAIN-207ENST00000570883 RNF112Q9ULX5 631 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 TP53TG5Q9Y2B4 290 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 DYRK1BQ9Y463 629 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 ASB1Q9Y576 335 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
RPAIN-207ENST00000570883 B8ZZF3 427 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 SOCS6O14544 535 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 OR1F1O43749 312 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 PRAMEF4O60810 478 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
RPAIN-207ENST00000570883 ZGLP1P0C6A0 271 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 MYBL2P10244 700 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 IL1RNP18510 177 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 MMP11P24347 488 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 GRK3P35626 688 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 GGT5P36269 586 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 MAGEA12P43365 314 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 SCTRP47872 440 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 HSPA7P48741 367 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 SERPINB8P50452 374 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 EFNA3P52797 238 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 MAT1AQ00266 395 aaKnown RBP12.73□□□□□ -0.37
RPAIN-207ENST00000570883 KLC1Q07866 573 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 FAM53BQ14153 422 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 SYT16Q17RD7 645 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 CDKL4Q5MAI5 379 aa12.73□□□□□ -0.37
RPAIN-207ENST00000570883 PRAMEF9Q5VWM5 478 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms