RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 NMRAL1Q9HBL8 299 aa14.45□□□□□ -0.1
RAB40B-203ENST00000570676 SSU72Q9NP77 194 aaKnown RBP14.45□□□□□ -0.1
RAB40B-203ENST00000570676 KCNK9Q9NPC2 374 aa14.45□□□□□ -0.1
RAB40B-203ENST00000570676 IRAK4Q9NWZ3 460 aa14.45□□□□□ -0.1
RAB40B-203ENST00000570676 MKS1Q9NXB0 559 aa14.45□□□□□ -0.1
RAB40B-203ENST00000570676 IFT80Q9P2H3 777 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-203ENST00000570676 PTRH2Q9Y3E5 179 aaKnown RBP14.45□□□□□ -0.1
RAB40B-203ENST00000570676 SHANK1Q9Y566 2161 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 A0A1B0GX78 115 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 TARM1B6A8C7 271 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 MYO1CO00159 1063 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 ONECUT2O95948 504 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 UMODP07911 640 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 MPC1LP0DKB6 136 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 CD1DP15813 335 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 OTX2P32243 289 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 GLRBP48167 497 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 ATP6V0D1P61421 351 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 YBX1P67809 324 aaKnown RBP14.44□□□□□ -0.1
RAB40B-203ENST00000570676 ZC3H12BQ5HYM0 836 aaKnown RBP14.44□□□□□ -0.1
RAB40B-203ENST00000570676 KLC3Q6P597 504 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 CYHR1Q6ZMK1 362 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 TTLL10Q6ZVT0 673 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 NEK10Q6ZWH5 1172 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 MED25Q71SY5 747 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 COX15Q7KZN9 410 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 RAB42Q8N4Z0 105 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 FDCSPQ8NFU4 85 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 MAGEC3Q8TD91 643 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 DLG3Q92796 817 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 FKBP10Q96AY3 582 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 SCYL1Q96KG9 808 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 SLC6A20Q9NP91 592 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 ZNF358Q9NW07 568 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 NDOR1Q9UHB4 597 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 GPN3Q9UHW5 284 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-203ENST00000570676 GRID1Q9ULK0 1009 aa14.44□□□□□ -0.1
RAB40B-203ENST00000570676 OR2A25A4D2G3 310 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 FITM1A5D6W6 292 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 NPEPPSL1A6NEC2 478 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 CDC7O00311 574 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 DSCR3O14972 297 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 ZBTB14O43829 449 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 TYROBPO43914 113 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 SORBS2O94875 1100 aaKnown RBP14.43□□□□□ -0.1
RAB40B-203ENST00000570676 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 TFEBP19484 476 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 HPDP32754 393 aaPredicted RBP14.43□□□□□ -0.1
RAB40B-203ENST00000570676 CD97P48960 835 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 ARSFP54793 590 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 RRADP55042 308 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 MLLT10P55197 1068 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 SSPNQ14714 243 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 NADK2Q4G0N4 442 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 FRMPD2BQ6IN97 320 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 PPP1R32Q7Z5V6 425 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 OR9A1PQ8NGU1 263 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 ZUFSPQ96AP4 578 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 GPR78Q96P69 363 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 SELENOSQ9BQE4 189 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 SYNPO2LQ9H987 977 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 CUTCQ9NTM9 273 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 TMEM216Q9P0N5 145 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 IKZF3Q9UKT9 509 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 PCDHGB7Q9Y5F8 929 aa14.43□□□□□ -0.1
RAB40B-203ENST00000570676 NBASA2RRP1 2371 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 TMEM120BA0PK00 339 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 CLEC18AA5D8T8 446 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 PRPF4O43172 522 aaKnown RBP eCLIP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 MED26O95402 600 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 CD63P08962 238 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 RPA3P35244 121 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 VSX2P58304 361 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 GRM7Q14831 915 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ACAP2Q15057 778 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 OR4D1Q15615 310 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 TSNQ15631 228 aaKnown RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 TCTE1Q5JU00 501 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 YOD1Q5VVQ6 348 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 CLEC18BQ6UXF7 455 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ISCA2Q86U28 154 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 DTWD1Q8N5C7 304 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 TTC29Q8NA56 475 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 CLEC18CQ8NCF0 446 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 FBXO15Q8NCQ5 510 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 TCP10LQ8TDR4 215 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ASB11Q8WXH4 323 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 KIAA1191Q96A73 305 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 PTERQ96BW5 349 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 IP6K3Q96PC2 410 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 SPSB2Q99619 263 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 SMAD5Q99717 465 aaKnown RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 SLC26A1Q9H2B4 701 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 C12orf65Q9H3J6 166 aaKnown RBP14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ALG9Q9H6U8 611 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 GPR83Q9NYM4 423 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 PLLPQ9Y342 182 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 ZNF451Q9Y4E5 1061 aa14.42□□□□□ -0.1
RAB40B-203ENST00000570676 DOCK10Q96BY6 2186 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms