RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PEX1O43933 1283 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 VPS26AO75436 327 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 C1orf105O95561 183 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 TNNT1P13805 278 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 PSMA3P25788 255 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 MSNP26038 577 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 CMPK1P30085 196 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ADH7P40394 386 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 AVPR1BP47901 424 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 HLCSP50747 726 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 MLF1P58340 268 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 SLC26A5P58743 744 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ACTN3Q08043 901 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 PRPSAP1Q14558 356 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 USP10Q14694 798 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 SLC25A35Q3KQZ1 300 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 FLYWCH1Q4VC44 716 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANKRD20A2Q5SQ80 823 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANKRD20A1Q5TYW2 823 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANKRD20A3Q5VUR7 823 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 SHEQ5VZ18 495 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ITPRIPL1Q6GPH6 555 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 PRSS41Q7RTY9 318 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ZFP62Q8NB50 900 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 OR51Q1Q8NH59 317 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ELP5Q8TE02 316 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 STYXQ8WUJ0 223 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 TMEM125Q96AQ2 219 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 LPAR4Q99677 370 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 PLEKHF2Q9H8W4 249 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 FEZ2Q9UHY8 353 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 HYOU1Q9Y4L1 999 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
CTDNEP1-202ENST00000570380 A0A1B0GTH6 734 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 CCDC162PA2VCL2 907 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 ARHGEF33A8MVX0 844 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 H0YIG0 161 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 H7C1Q1 480 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 TXNDC9O14530 226 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 PHF2O75151 1096 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 APOA4P06727 396 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 AOAHP28039 575 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 UQCRC1P31930 480 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 TRHRP34981 398 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 XCR1P46094 333 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 GPR85P60893 370 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 DCAF7P61962 342 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 PTK6Q13882 451 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 POU6F1Q14863 301 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 NAA25Q14CX7 972 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 DAZAP2Q15038 168 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 ZNF425Q6IV72 752 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 TTC23LQ6PF05 361 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 WDR53Q7Z5U6 358 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 KRT222Q8N1A0 295 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 RAB42Q8N4Z0 105 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 SLC35G2Q8TBE7 412 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 FAM222BQ8WU58 562 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 RERGQ96A58 199 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 SPATA13Q96N96 652 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 CARD6Q9BX69 1037 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 MRPS30Q9NP92 439 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 HCN3Q9P1Z3 774 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 RUVBL2Q9Y230 463 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 FREM3P0C091 2139 aa9.77□□□□□ -0.85
CTDNEP1-202ENST00000570380 NCKAP5O14513 1909 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 hCG_1818297A0A087WSY0 165 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 MROH6A6NGR9 719 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 H7C0C1 242 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 SYT5O00445 386 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 NSA2O95478 260 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 STATHP02808 62 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 CD53P19397 219 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PEX19P40855 299 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 ATP5OP48047 213 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PPP2R2BQ00005 443 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 RHAGQ02094 409 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 ABRAXAS2Q15018 415 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 NSDHLQ15738 373 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 STX1AQ16623 288 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 NDUFA9Q16795 377 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 ZNF585AQ6P3V2 769 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PAOXQ6QHF9 649 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 SASS6Q6UVJ0 657 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 SUSD1Q6UWL2 747 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 B3GNT6Q6ZMB0 384 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 MDGA2Q7Z553 956 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PCGF5Q86SE9 256 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 CCDC50Q8IVM0 306 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 SLCO2A1Q92959 643 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 TSLPQ969D9 159 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 SARGQ9BW04 601 aa9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 BEX4Q9NWD9 120 aaPredicted RBP9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PIH1D1Q9NWS0 290 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-202ENST00000570380 PCYOX1Q9UHG3 505 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms