RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 DTWD1Q8N5C7 304 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 ZBTB44Q8NCP5 570 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 CEP70Q8NHQ1 597 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 ACTRT2Q8TDY3 377 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 LCN9Q8WX39 176 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 USP7Q93009 1102 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 SH3KBP1Q96B97 665 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 TUBGCP3Q96CW5 907 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 PTCD3Q96EY7 689 aaKnown RBP9.62□□□□□ -0.87
GDE1-205ENST00000569899 HAUS8Q9BT25 410 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 ZNF385DQ9H6B1 395 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 AKTIPQ9H8T0 292 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 SLC40A1Q9NP59 571 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 SAR1AQ9NR31 198 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 SPHK1Q9NYA1 384 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
GDE1-205ENST00000569899 ZNF490Q9ULM2 529 aaPredicted RBP9.62□□□□□ -0.87
GDE1-205ENST00000569899 PIPSLA2A3N6 862 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 OR5K4A6NMS3 321 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 PRR5-ARHGAP8B1AHC4 643 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 LMO7DNF2Z398 122 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 BTN3A3O00478 584 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 TM4SF5O14894 197 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 YY2O15391 372 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 KDM1AO60341 852 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 NOBOXO60393 691 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 KRT6AP02538 564 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 KRT6BP04259 564 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 CHRM5P08912 532 aaPredicted RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 ALDOCP09972 364 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 PRR35P0CG20 571 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 SLC2A4P14672 509 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 HNF4AP41235 474 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 KRT6CP48668 564 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 NEK2P51955 445 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 HMGCS1Q01581 520 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 HHEXQ03014 270 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 GRIK2Q13002 908 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 DDX39BQ13838 428 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 TBCCQ15814 346 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 LPAL2Q16609 132 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ZNF528Q3MIS6 628 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 FRG2Q64ET8 278 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ICE2Q659A1 982 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 PRR23BQ6ZRT6 265 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 RNF165Q6ZSG1 346 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 Q6ZSR9 355 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 CCDC121Q6ZUS5 278 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 AMIGO1Q86WK6 493 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 C17orf64Q86WR6 236 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 SYT12Q8IV01 421 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ADGRF3Q8IZF5 1079 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 OR4E2Q8NGC2 313 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 OR2A1Q8NGT9 310 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 SETD7Q8WTS6 366 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 SELENOMQ8WWX9 145 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 MTFMTQ96DP5 389 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 WDR34Q96EX3 536 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ZC3H10Q96K80 434 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 MAGEB10Q96LZ2 347 aaPredicted RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 FRG2BQ96QU4 278 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 SRMSQ9H3Y6 488 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ELOVL6Q9H5J4 265 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 GEMIN8Q9NWZ8 242 aaKnown RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 SNX6Q9UNH7 406 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 RALGAPA1Q6GYQ0 2036 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 ARID1BQ8NFD5 2236 aaPredicted RBP9.61□□□□□ -0.87
GDE1-205ENST00000569899 CABIN1Q9Y6J0 2220 aa9.61□□□□□ -0.87
GDE1-205ENST00000569899 IGKV1-8A0A0C4DH67 115 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 PATE3B3GLJ2 98 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 LSM1O15116 133 aaKnown RBP9.6□□□□□ -0.87
GDE1-205ENST00000569899 PRICKLE3O43900 615 aaPredicted RBP9.6□□□□□ -0.87
GDE1-205ENST00000569899 NRP2O60462 931 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CCDC22O60826 627 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 PEX11AO75192 247 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 ULK1O75385 1050 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CBX6O95503 412 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CFIP05156 583 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 ANXA6P08133 673 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 C1GALT1C1LP0DN25 315 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 PCNAP12004 261 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CNR2P34972 360 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CASP2P42575 452 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 BNIP3Q12983 259 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 GOLGA4Q13439 2230 aaKnown RBP9.6□□□□□ -0.87
GDE1-205ENST00000569899 SIM2Q14190 667 aaPredicted RBP9.6□□□□□ -0.87
GDE1-205ENST00000569899 SHBQ15464 509 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 GALNTL6Q49A17 601 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 FAM91A1Q658Y4 838 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 SLC9B2Q86UD5 537 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 KYQ8NBH2 561 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 GALNT11Q8NCW6 608 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 ZNF740Q8NDX6 193 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 OR10G6Q8NH81 332 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 WDR20Q8TBZ3 569 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 ELF4Q99607 663 aaPredicted RBP9.6□□□□□ -0.87
GDE1-205ENST00000569899 EFCAB11Q9BUY7 163 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 C1orf50Q9BV19 199 aa9.6□□□□□ -0.87
GDE1-205ENST00000569899 CCDC106Q9BWC9 280 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms