RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FAM184AQ8NB25 1140 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 OR4N2Q8NGD1 307 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 OR52K1Q8NGK4 314 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 HUS1BQ8NHY5 278 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 TAS1R2Q8TE23 839 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 FIG4Q92562 907 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 IGSF8Q969P0 613 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 ZNF501Q96CX3 271 aaPredicted RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 SNRNP40Q96DI7 357 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 SGF29Q96ES7 293 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CDKN2AIPNLQ96HQ2 116 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 LRFN5Q96NI6 719 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 QRFPRQ96P65 431 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 SEPHS2Q99611 448 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 OLFM1Q99784 485 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CCT7Q99832 543 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 PAIP2Q9BPZ3 127 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 TBC1D10AQ9BXI6 508 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 ECT2Q9H8V3 914 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 LMAN1LQ9HAT1 526 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 WDR6Q9NNW5 1121 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 RPRD1BQ9NQG5 326 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 PNPLA3Q9NST1 481 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 MTMR10Q9NXD2 777 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 UTP6Q9NYH9 597 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 NDUFA13Q9P0J0 144 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 STK26Q9P289 416 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 TRAF3IP3Q9Y228 551 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CLIC4Q9Y696 253 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 FAM230AA0A1W2PPH8 454 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 hDV102S1A0JD36 115 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 HSPB2A8KAH6 182 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 MEIS2O14770 477 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 HS3ST1O14792 307 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 MAGEB2O15479 319 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 BUB1O43683 1085 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 FCGR3BO75015 233 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 ATP9AO75110 1047 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 BAG4O95429 457 aaKnown RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 CLDN14O95500 239 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CXCL14O95715 111 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 GH2P01242 217 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 KRT8P05787 483 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 LINC00271P0C7V0 271 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PLA2G4BP0C869 781 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CALCBP10092 127 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SKILP12757 684 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CSF2RAP15509 400 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CDH3P22223 829 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CALB2P22676 271 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 ALDH4A1P30038 563 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 NOVP48745 357 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 FUT6P51993 359 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 BRWD1-AS2P59051 145 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 HAND2P61296 217 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 HNRNPKP61978 463 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD9-220ENST00000569794 UBE2HP62256 183 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 ITGADQ13349 1161 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 TNK1Q13470 666 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PDE7AQ13946 482 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD9-220ENST00000569794 WDR43Q15061 677 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD9-220ENST00000569794 RCN1Q15293 331 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 HSPB2Q16082 182 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SYT16Q17RD7 645 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SOWAHAQ2M3V2 549 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CCDC152Q4G0S7 254 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CFAP221Q4G0U5 840 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 LRRC38Q5VT99 294 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 KCTD11Q693B1 232 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PHLDB2Q86SQ0 1253 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 KIAA0895Q8NCT3 520 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 GJC3Q8NFK1 279 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 OR2T34Q8NGX1 318 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 LNX1Q8TBB1 728 aaPredicted RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 TRPC4APQ8TEL6 797 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 TMEM170AQ8WVE7 144 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 RAPGEF5Q92565 580 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 ANP32BQ92688 251 aaKnown RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 FBXO32Q969P5 355 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SPDL1Q96EA4 605 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 LINGO1Q96FE5 620 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 EGLN2Q96KS0 407 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 NECTIN4Q96NY8 510 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 LRRC3BQ96PB8 259 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SMC6Q96SB8 1091 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PCYT2Q99447 389 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 FAM213AQ9BRX8 229 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PCGF1Q9BSM1 259 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 CAPS2Q9BXY5 557 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 PPIL3Q9H2H8 161 aaKnown RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 VCX2Q9H322 139 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 SUDS3Q9H7L9 328 aaPredicted RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 TBC1D17Q9HA65 648 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 FAM114A2Q9NRY5 505 aa4.44□□□□□ -1.7
CHD9-220ENST00000569794 ZCCHC3Q9NUD5 404 aaKnown RBP4.44□□□□□ -1.7
CHD9-220ENST00000569794 TCP11L1Q9NUJ3 509 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms