RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RNF112Q9ULX5 631 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 SPTA1P02549 2419 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 TRBC2A0A5B9 178 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 FOXS1O43638 330 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 OR1F1O43749 312 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 RFPL1O75677 317 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 IPO13O94829 963 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 WDR47O94967 919 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 GNAZP19086 355 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 TFEBP19484 476 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 FBLP22087 321 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 TYK2P29597 1187 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 GMPRP36959 345 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 BCL6P41182 706 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 GDF5P43026 501 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 MSH2P43246 934 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 SERPINB9P50453 376 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 CSRP3P50461 194 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 RRADP55042 308 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 MEF2AQ02078 507 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 OCA2Q04671 838 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 DLG1Q12959 904 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 NXPE4Q6UWF7 544 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 MED25Q71SY5 747 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ASPGQ86U10 573 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 PDPRQ8NCN5 879 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 SLC13A3Q8WWT9 602 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 NXNL1Q96CM4 212 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 MMABQ96EY8 250 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ABHD17AQ96GS6 310 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 TSNARE1Q96NA8 513 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 PAFAH2Q99487 392 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 SPSB2Q99619 263 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 DRC3Q9H069 523 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ING2Q9H160 280 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ALG9Q9H6U8 611 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 PELI2Q9HAT8 420 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 SNX15Q9NRS6 342 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 IGSF5Q9NSI5 407 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF282Q9UDV7 671 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
HERPUD1-218ENST00000569569 PCSK5Q92824 1860 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 IGLV3-12A0A075B6K2 115 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 A0A096LPK6 155 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 A0A0A6YYC8 382 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 CCDC189A1A4V9 331 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 I3L1I5 382 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 PEX12O00623 359 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TAPBPO15533 448 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 STK16O75716 305 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 IGHEP01854 428 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 STATHP02808 62 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 S100BP04271 92 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 UMODP07911 640 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 SLC35G6P0C7Q6 338 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 AHRP35869 848 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 AVPR1BP47901 424 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 KCNC1P48547 511 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 SERPINB8P50452 374 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 FOXL2P58012 376 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 PWP1Q13610 501 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 ATP1A4Q13733 1029 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 DSG2Q14126 1118 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 FAM83EQ2M2I3 478 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TMEM214Q6NUQ4 689 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TAOK1Q7L7X3 1001 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TMPRSS11BQ86T26 416 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 CENPLQ8N0S6 344 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 RHEBL1Q8TAI7 183 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 ATOH8Q96SQ7 321 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 SOX17Q9H6I2 414 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 GPRC5BQ9NZH0 403 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 CTSFQ9UBX1 484 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF180Q9UJW8 692 aa13.13□□□□□ -0.31
HERPUD1-218ENST00000569569 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 B8ZZF3 427 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 H0YIG0 161 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 KERAO60938 352 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 H2AFYO75367 372 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms