RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TMEM214Q6NUQ4 689 aaKnown RBP19.27■□□□□ 0.68
CLK3-225ENST00000569063 JMJD6Q6NYC1 403 aaPredicted RBP19.27■□□□□ 0.68
CLK3-225ENST00000569063 IGFL3Q6UXB1 125 aa19.27■□□□□ 0.68
CLK3-225ENST00000569063 LAPTM4BQ86VI4 370 aa19.27■□□□□ 0.68
CLK3-225ENST00000569063 CAMKVQ8NCB2 501 aa19.27■□□□□ 0.68
CLK3-225ENST00000569063 C16orf45Q96MC5 204 aaPredicted RBP19.27■□□□□ 0.68
CLK3-225ENST00000569063 TXNDC16Q9P2K2 825 aa19.27■□□□□ 0.68
CLK3-225ENST00000569063 MRPS2Q9Y399 296 aaKnown RBP19.27■□□□□ 0.68
CLK3-225ENST00000569063 OARD1Q9Y530 152 aa19.27■□□□□ 0.68
CLK3-225ENST00000569063 NUP210LQ5VU65 1888 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 NPEPPSL1A6NEC2 478 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 IPO13O94829 963 aaKnown RBP19.26■□□□□ 0.67
CLK3-225ENST00000569063 SORBS2O94875 1100 aaKnown RBP19.26■□□□□ 0.67
CLK3-225ENST00000569063 MAGEA4P43358 317 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 AVPR1BP47901 424 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 MLLT10P55197 1068 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 SNRPNP63162 240 aaKnown RBP19.26■□□□□ 0.67
CLK3-225ENST00000569063 ADAMTSL2Q86TH1 951 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 ASPGQ86U10 573 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 PRSS58Q8IYP2 241 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 RBMXL3Q8N7X1 1067 aaKnown RBP19.26■□□□□ 0.67
CLK3-225ENST00000569063 MFSD9Q8NBP5 474 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 MIB2Q96AX9 1013 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 TSPAN17Q96FV3 270 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 GPR22Q99680 433 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 RBBP8Q99708 897 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 YIPF2Q9BWQ6 316 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 DERL2Q9GZP9 239 aa19.26■□□□□ 0.67
CLK3-225ENST00000569063 NSA2O95478 260 aaKnown RBP19.25■□□□□ 0.67
CLK3-225ENST00000569063 STATHP02808 62 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 ACPPP15309 386 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 GP5P40197 560 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 CD97P48960 835 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 HNMTP50135 292 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 EMP2P54851 167 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 CCDC25Q86WR0 208 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 OR9A4Q8NGU2 314 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 SLC13A3Q8WWT9 602 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 NEIL2Q969S2 332 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 PNPLA2Q96AD5 504 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 MACROD1Q9BQ69 325 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 LRRC1Q9BTT6 524 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 CAB39LQ9H9S4 337 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 LRRC4CQ9HCJ2 640 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 CTNNAL1Q9UBT7 734 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 PLAAQ9Y263 795 aa19.25■□□□□ 0.67
CLK3-225ENST00000569063 A0A1W2PQ72 361 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 TRBC2A0A5B9 178 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 TTLL8A6PVC2 850 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 IDSB3KWA1 339 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 MAP2K7O14733 419 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 FFAR3O14843 346 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 PCDH17O14917 1159 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 GPR42O15529 346 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 ALOX12BO75342 701 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 URI1O94763 535 aaPredicted RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 HPP00738 406 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 ITGA3P26006 1051 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 SLC7A5Q01650 507 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 MEF2AQ02078 507 aaPredicted RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 GUCY2DQ02846 1103 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 CSHL1Q14406 222 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 USP10Q14694 798 aaKnown RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 TSNQ15631 228 aaKnown RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 SYT16Q17RD7 645 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 WHAMMP3Q1A5X7 153 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 KBTBD12Q3ZCT8 623 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 CATSPEREQ5SY80 951 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 SLC6A19Q695T7 634 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 C8orf74Q6P047 294 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 PRSS41Q7RTY9 318 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 THOC6Q86W42 341 aaKnown RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 ZC3H7AQ8IWR0 971 aaKnown RBP19.24■□□□□ 0.67
CLK3-225ENST00000569063 KCT2Q8NC54 265 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 SLC5A11Q8WWX8 675 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 MESP1Q9BRJ9 268 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 SLC22A7Q9Y694 548 aa19.24■□□□□ 0.67
CLK3-225ENST00000569063 SPENQ96T58 3664 aaKnown RBP19.23■□□□□ 0.67
CLK3-225ENST00000569063 OR1F1O43749 312 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 BMP10O95393 424 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 HEXBP07686 556 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 SLC35G6P0C7Q6 338 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 STMN1P16949 149 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 STX2P32856 288 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 MAT1AQ00266 395 aaKnown RBP19.23■□□□□ 0.67
CLK3-225ENST00000569063 PWP1Q13610 501 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 ZKSCAN8Q15776 578 aaPredicted RBP19.23■□□□□ 0.67
CLK3-225ENST00000569063 GRTP1Q5TC63 336 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 CTAGE3PQ8IX95 158 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 KLHDC8AQ8IYD2 350 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 TBC1D19Q8N5T2 526 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 Q8NA96 180 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 TM9SF4Q92544 642 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 C8orf44Q96CB5 159 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 EGFL8Q99944 293 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 MFRPQ9BY79 579 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 LHPPQ9H008 270 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 ANKHQ9HCJ1 492 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 ZDHHC18Q9NUE0 388 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 SLC22A14Q9Y267 594 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms