RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SLC25A12O75746 678 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 MATN4O95460 622 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 NSA2O95478 260 aaKnown RBP11.74□□□□□ -0.53
SNX29-207ENST00000568949 RPS3P23396 243 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX29-207ENST00000568949 ATP5DP30049 168 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 HSD17B2P37059 387 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 MAGEA1P43355 309 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 TAS2R50P59544 299 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 MFSD4BQ5TF39 518 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 ICE2Q659A1 982 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 MARVELD2Q8N4S9 558 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 OR9A4Q8NGU2 314 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 ZNF778Q96MU6 729 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 LPAR4Q99677 370 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 P2RY12Q9H244 342 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 TSPY26PQ9H489 355 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 TRIM45Q9H8W5 580 aaPredicted RBP11.74□□□□□ -0.53
SNX29-207ENST00000568949 CATSPERZQ9NTU4 200 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 PCYOX1Q9UHG3 505 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 RNF6Q9Y252 685 aa11.74□□□□□ -0.53
SNX29-207ENST00000568949 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
SNX29-207ENST00000568949 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 NKX2-6A6NCS4 301 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 FAM90A27PA6NNH2 459 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 MYO1CO00159 1063 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 TPOP07202 933 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 FOSL1P15407 271 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 PTGER1P34995 402 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 ST13P50502 369 aaKnown RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 RWDD2BP57060 319 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 ABATP80404 500 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 GBX1Q14549 363 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 SUSD1Q6UWL2 747 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 LDB1Q86U70 411 aaPredicted RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 CD163Q86VB7 1156 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 MPP5Q8N3R9 675 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 CPSF7Q8N684 471 aaKnown RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 OR51Q1Q8NH59 317 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 RND1Q92730 232 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 DNHD1Q96M86 4753 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 UCK2Q9BZX2 261 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 MARCH4Q9P2E8 410 aaPredicted RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 TAC3Q9UHF0 121 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
SNX29-207ENST00000568949 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
SNX29-207ENST00000568949 SCN3AQ9NY46 2000 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 TMEM200CA6NKL6 621 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 USP27XA6NNY8 438 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 ARHGEF33A8MVX0 844 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 NDC80O14777 642 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 CD3EAPO15446 510 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 ZWINTO95229 277 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 BCL6P41182 706 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 XCR1P46094 333 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 CYB561P49447 251 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 SNRPNP63162 240 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 MYBPHQ13203 477 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 USP10Q14694 798 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 PPP1R21Q6ZMI0 780 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 RPS19BP1Q86WX3 136 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 CLYBLQ8N0X4 340 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 PLPP5Q8NEB5 264 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 NRGNQ92686 78 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 TP63Q9H3D4 680 aaPredicted RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 CDCP1Q9H5V8 836 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 DLL4Q9NR61 685 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 FAM114A2Q9NRY5 505 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 CCM2LQ9NUG4 571 aaPredicted RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 KLF13Q9Y2Y9 288 aaPredicted RBP11.72□□□□□ -0.53
SNX29-207ENST00000568949 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 FBN3Q75N90 2809 aa11.72□□□□□ -0.53
SNX29-207ENST00000568949 ZNF407Q9C0G0 2248 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 ZNF469Q96JG9 3925 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 KCNE1BA0A087WTH5 132 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 OR2W5A6NFC9 320 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 HAT1O14929 419 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 TFECO14948 347 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 KLK8O60259 260 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 KIF5CO60282 957 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 PSIP1O75475 530 aaKnown RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 NDUFS3O75489 264 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 IL10P22301 178 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 TPP2P29144 1249 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 PNLIPRP1P54315 467 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 GDF10P55107 478 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 SLC26A5P58743 744 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 FOXD4Q12950 439 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms