RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 ALPPL2P10696 532 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 IGFALSP35858 605 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 ANXA11P50995 505 aaKnown RBP11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 OR13H1Q8NG92 308 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 C3orf30Q96M34 536 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 ZIM2Q9NZV7 527 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 MAGEB17A8MXT2 336 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 KRT36O76013 467 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 RAB8AP61006 207 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 LRP8Q14114 963 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 MINDY4Q4G0A6 757 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 FGD3Q5JSP0 725 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 GJD3Q8N144 294 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 NCSTNQ92542 709 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 PDXPQ96GD0 296 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
TMEM170A-205ENST00000568559 UBFD1O14562 309 aaKnown RBP11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 PRPS1L1P21108 318 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 HNRNPKP61978 463 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 YPEL5P62699 121 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 HERC3Q15034 1050 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 PRPF38BQ5VTL8 546 aaKnown RBP11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 STK32CQ86UX6 486 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 GPR135Q8IZ08 494 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 SYNPOQ8N3V7 929 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 DENND6BQ8NEG7 585 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 HUS1BQ8NHY5 278 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 MCMBPQ9BTE3 642 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 KLHL20Q9Y2M5 609 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 SLC5A10A0PJK1 596 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 PSMG1O95456 288 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 TSPAN12O95859 305 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 CDKL1Q00532 357 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 HEPACAMQ14CZ8 416 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 ZCCHC8Q6NZY4 707 aaKnown RBP11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 SFRP1Q8N474 314 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 RGMAQ96B86 450 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 GABRG3Q99928 467 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 SPATA7Q9P0W8 599 aa11.71□□□□□ -0.53
TMEM170A-205ENST00000568559 DNAH12Q6ZR08 3092 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 IMPA1P29218 277 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 RNF144AP50876 292 aaPredicted RBP11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 HHEXQ03014 270 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 SRSF11Q05519 484 aaKnown RBP11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 CDKN3Q16667 212 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 SPANXN4Q5MJ08 99 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 IZUMO2Q6UXV1 221 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 NUDT13Q86X67 352 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 FRMD1Q8N878 549 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 OR52E1Q8NGJ3 308 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 OR6Y1Q8NGX8 325 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 ZFP28Q8NHY6 868 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 DNAJC9Q8WXX5 260 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 OR1E3Q8WZA6 343 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 DUSP26Q9BV47 211 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 DENND2DQ9H6A0 471 aaPredicted RBP11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.54
TMEM170A-205ENST00000568559 FAM149AA5PLN7 773 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 PTGES3LE9PB15 166 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ITGAXP20702 1163 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 CA5AP35218 305 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 MED21Q13503 144 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 NOXRED1Q6NXP6 359 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 SLC2A7Q6PXP3 512 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 Q8N9G6 341 aaPredicted RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 FAM110BQ8TC76 370 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ZDHHC1Q8WTX9 485 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 NTMT1Q9BV86 223 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 IL21RQ9HBE5 538 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ZNF780BQ9Y6R6 833 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ANHXE9PGG2 379 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 TAPBPO15533 448 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 NUDT1P36639 197 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 CSTF1Q05048 431 aaKnown RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 RFTN2Q52LD8 501 aaPredicted RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 OR4F3Q6IEY1 312 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 METTL2BQ6P1Q9 378 aaKnown RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 CYHR1Q6ZMK1 362 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 SYT13Q7L8C5 426 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 GALNT10Q86SR1 603 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 PMEPA1Q969W9 287 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 SLC6A18Q96N87 628 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 SLC23A2Q9UGH3 650 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ADGRE2Q9UHX3 823 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ZFR2Q9UPR6 939 aaKnown RBP11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 TSC2P49815 1807 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 TARM1B6A8C7 271 aa11.7□□□□□ -0.54
TMEM170A-205ENST00000568559 ADAM23O75077 832 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms