RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FAM129AQ9BZQ8 928 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 LHPPQ9H008 270 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 DRC3Q9H069 523 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ILKAPQ9H0C8 392 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 SYNPO2LQ9H987 977 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PLAC1Q9HBJ0 212 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 MKKSQ9NPJ1 570 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 ABCF3Q9NUQ8 709 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 C14orf105Q9NVL8 296 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 CUEDC1Q9NWM3 386 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 ARL15Q9NXU5 204 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 NSMCE4AQ9NXX6 385 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ZFATQ9P243 1243 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 GMPR2Q9P2T1 348 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 TRPC4Q9UBN4 977 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 C3orf18Q9UK00 162 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PYCARDQ9ULZ3 195 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 VWA7Q9Y334 891 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 MAP4K5Q9Y4K4 846 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 CRYBG3Q68DQ2 2970 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 A0A0A6YYC8 382 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 NSG1A0A0A6YYJ2 146 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 A0A1W2PQ72 361 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FEZF1A0PJY2 475 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 IDSB3KWA1 339 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 E7ESA3 106 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 I3L1I5 382 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 MASP2O00187 686 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FANCGO15287 622 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 EIF3HO15372 352 aaKnown RBP eCLIP4.54□□□□□ -1.68
CLK3-219ENST00000567805 P2RX6O15547 441 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FOXS1O43638 330 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ALOX12BO75342 701 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NSA2O95478 260 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 HEXBP07686 556 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 CYC1P08574 325 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 SLC35G6P0C7Q6 338 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 COX6A1P12074 109 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 CDH1P12830 882 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NPPBP16860 134 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 CXCR2P25025 360 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 RPL21P46778 160 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 EMP2P54851 167 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 AP2B1P63010 937 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 CSNK1G2P78368 415 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 MGAT5Q09328 741 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 PDIA2Q13087 525 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NAE1Q13564 534 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FASTKD3Q14CZ7 662 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 INPP5JQ15735 1006 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 PHKG1Q16816 387 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 PRR30Q53SZ7 412 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 CAPN13Q6MZZ7 669 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 TMEM214Q6NUQ4 689 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 SBSNQ6UWP8 590 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 IGFL2Q6UWQ7 119 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 Q6ZS92 163 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NDUFAF7Q7L592 441 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 MAATS1Q7Z4T9 603 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 VN1R4Q7Z5H5 301 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 STRA8Q7Z7C7 330 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ZC3HC1Q86WB0 502 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 PLD3Q8IV08 490 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ANKMY2Q8IV38 441 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 KBTBD2Q8IY47 623 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 PRSS58Q8IYP2 241 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ZBED8Q8IZ13 594 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NKAPQ8N5F7 415 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 TBC1D19Q8N5T2 526 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 CAMKVQ8NCB2 501 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FBXO36Q8NEA4 188 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 SPATA4Q8NEY3 305 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ABHD11Q8NFV4 315 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 OR4K1Q8NGD4 311 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 OR56A3Q8NH54 315 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 PPP4R1Q8TF05 950 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ATL1Q8WXF7 558 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ANKRD7Q92527 254 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ALKBH8Q96BT7 664 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 C8orf44Q96CB5 159 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FBXL8Q96CD0 374 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 TM4SF19Q96DZ7 209 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 THOC3Q96J01 351 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 UCN2Q96RP3 112 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 LMF1Q96S06 567 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 KRT12Q99456 494 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 WDR77Q9BQA1 342 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 ERP44Q9BS26 406 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 SARGQ9BW04 601 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 YIPF2Q9BWQ6 316 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 TRIM31Q9BZY9 425 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ATG10Q9H0Y0 220 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 EPS8L2Q9H6S3 715 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 ZBTB20Q9HC78 741 aaPredicted RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 ZNF160Q9HCG1 818 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 RIC8BQ9NVN3 520 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 MOCS1Q9NZB8 636 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms