RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 NUP210LQ5VU65 1888 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 LOC105369274A0A096LPK9 316 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 IGHV3-20A0A0C4DH32 117 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 LOC102723532A0A0G2JNH3 316 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 A0A0G2JNJ9 132 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 A0A0J9YVX5 310 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 C5orf60A6NFR6 353 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 NPIPA2E9PIF3 369 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 NPIPA3F8WFD2 350 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 KIF2AO00139 706 aaPredicted RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 NDC80O14777 642 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 SMPD2O60906 423 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CTSVO60911 334 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 GOSR1O95249 250 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 MED26O95402 600 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CYC1P08574 325 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 GLI4P10075 376 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 EPXP11678 715 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 TCP1P17987 556 aaKnown RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 ITGALP20701 1170 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 PKLRP30613 574 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CHRNA4P43681 627 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 MARCKSL1P49006 195 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 GNG11P61952 73 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 ETF1P62495 437 aaKnown RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 TAF1AQ15573 450 aaPredicted RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC1A5Q15758 541 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 KAZNQ674X7 775 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 FRMPD2BQ6IN97 320 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 ZNF585AQ6P3V2 769 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 SNX20Q7Z614 316 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 RPS19BP1Q86WX3 136 aaKnown RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 OR4N4Q8N0Y3 316 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CREB3L4Q8TEY5 395 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 VAT1Q99536 393 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 ZFYVE21Q9BQ24 234 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 B4GALT7Q9UBV7 327 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 Q9UFV3 132 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 PACSIN2Q9UNF0 486 aaPredicted RBP8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 ARL5AQ9Y689 179 aa8.51□□□□□ -1.05
VPS9D1-205ENST00000565452 CTAGE9A4FU28 777 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 TUBAL3A6NHL2 446 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 FFAR3O14843 346 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 BCKDKO14874 412 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 GPR42O15529 346 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 WIPF1O43516 503 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 PEX1O43933 1283 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 AP2A2O94973 939 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 RPN2P04844 631 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 STIP1P31948 543 aaKnown RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 AGTR2P50052 363 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 XIAPP98170 497 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 KLF1Q13351 362 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 BRD3Q15059 726 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 PRTGQ2VWP7 1150 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 MFSD4BQ5TF39 518 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 GARNL3Q5VVW2 1013 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 CXorf67Q86X51 503 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 KIF18BQ86Y91 864 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC13A5Q86YT5 568 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 RASGEF1CQ8N431 466 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 LMNTD1Q8N9Z9 388 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 OR5M9Q8NGP3 310 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 TFB1MQ8WVM0 346 aaKnown RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 ELMO1Q92556 727 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 PIGTQ969N2 578 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 OLFM3Q96PB7 478 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 NPAS2Q99743 824 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 NAPGQ99747 312 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 PIP5K1AQ99755 562 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 YIPF4Q9BSR8 244 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 HEMGNQ9BXL5 484 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 DEFB127Q9H1M4 99 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 TRIM45Q9H8W5 580 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 FOXD3Q9UJU5 478 aaPredicted RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC39A10Q9ULF5 831 aa8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 DRG1Q9Y295 367 aaKnown RBP8.5□□□□□ -1.05
VPS9D1-205ENST00000565452 IGLV3-16A0A075B6K0 115 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 OR14I1A6ND48 311 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 QSOX1O00391 747 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 MAN1A2O60476 641 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 CRTAMO95727 393 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 FTH1P02794 183 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 PTPN3P26045 913 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 RFC3P40938 356 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 HLCSP50747 726 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 DYNLT1P63172 113 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 NAA25Q14CX7 972 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms