RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 MLIPQ5VWP3 458 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 ZNF425Q6IV72 752 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 RNF44Q7L0R7 432 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 N4BP2L2Q92802 583 aaPredicted RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 ACAT2Q9BWD1 397 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 ZNF552Q9H707 407 aaPredicted RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 P4HTMQ9NXG6 502 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 EURLQ9NYK6 297 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 GPN3Q9UHW5 284 aaPredicted RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 PTRH2Q9Y3E5 179 aaKnown RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 CACNA1DQ01668 2161 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 CDC7O00311 574 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 PHGDHO43175 533 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 NRP2O60462 931 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 CCNDBP1O95273 360 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 STMN1P16949 149 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 SLC12A2P55011 1212 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 ABATP80404 500 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 DCDP81605 110 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 ELOAQ14241 798 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 AGTRAPQ6RW13 159 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 Q6ZS92 163 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 PAQR7Q86WK9 346 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 MCATQ8IVS2 390 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 ZADH2Q8N4Q0 377 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 NACC2Q96BF6 587 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 PTERQ96BW5 349 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 FBXL8Q96CD0 374 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 UBXN10Q96LJ8 280 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 DPH7Q9BTV6 452 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 SGPP1Q9BX95 441 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 DERL2Q9GZP9 239 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 SPRTNQ9H040 489 aaPredicted RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 MRPS30Q9NP92 439 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 CCDC177Q9NQR7 707 aaPredicted RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 NDOR1Q9UHB4 597 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 SRPK3Q9UPE1 567 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 PCDHGA10Q9Y5H3 936 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 COPG1Q9Y678 874 aaKnown RBP18.04■□□□□ 0.48
NME3-207ENST00000564628 CRYBG3Q68DQ2 2970 aa18.04■□□□□ 0.48
NME3-207ENST00000564628 HMX2A2RU54 273 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 NPEPPSL1A6NEC2 478 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 ZSCAN9O15535 394 aaPredicted RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 ACSL3O95573 720 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 HIST1H2AGP0C0S8 130 aaPredicted RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 HIST1H2ADP20671 130 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 RAB10P61026 200 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 RELAQ04206 551 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 ZC3H12BQ5HYM0 836 aaKnown RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 PRAMEF13Q5VWM6 474 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 MRPL14Q6P1L8 145 aaKnown RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 TLDC1Q6P9B6 456 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 HDXQ7Z353 690 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 PPP1R32Q7Z5V6 425 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 ADAMTSL2Q86TH1 951 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 GSPT2Q8IYD1 628 aaKnown RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 OR56A3Q8NH54 315 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 HIST1H2AHQ96KK5 128 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 HIST1H2AJQ99878 128 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 PLCD4Q9BRC7 762 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 H2AFJQ9BTM1 129 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 TXLNGYQ9BZA5 131 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 PCBD2Q9H0N5 130 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 ARL15Q9NXU5 204 aa18.03■□□□□ 0.48
NME3-207ENST00000564628 IFT80Q9P2H3 777 aaPredicted RBP18.03■□□□□ 0.48
NME3-207ENST00000564628 ATP8B1O43520 1251 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 FAM153BP0C7A2 387 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 SLC35E2BP0CK96 405 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 CCND1P24385 295 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 CDKL1Q00532 357 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 TSTA3Q13630 321 aaPredicted RBP18.02■□□□□ 0.48
NME3-207ENST00000564628 FAM153CQ494X1 144 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 C1orf189Q5VU69 101 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 MREGQ8N565 214 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 ST6GALNAC3Q8NDV1 305 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 SLC44A1Q8WWI5 657 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 TRIM54Q9BYV2 358 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 ATG10Q9H0Y0 220 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 ATP13A2Q9NQ11 1180 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 AGPAT4Q9NRZ5 378 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 OARD1Q9Y530 152 aa18.02■□□□□ 0.48
NME3-207ENST00000564628 LRBAP50851 2863 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 FITM1A5D6W6 292 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 SRPX2O60687 465 aaPredicted RBP18.01■□□□□ 0.47
NME3-207ENST00000564628 ABHD2P08910 425 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 CCDC166P0CW27 439 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 CD1DP15813 335 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 AIMP2Q13155 320 aaKnown RBP18.01■□□□□ 0.47
NME3-207ENST00000564628 NAE1Q13564 534 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 TSNQ15631 228 aaKnown RBP18.01■□□□□ 0.47
NME3-207ENST00000564628 NKAIN1Q4KMZ8 207 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 TCTE1Q5JU00 501 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 FBXO42Q6P3S6 717 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 LCTLQ6UWM7 567 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 TRMT10CQ7L0Y3 403 aaKnown RBP18.01■□□□□ 0.47
NME3-207ENST00000564628 CMC1Q7Z7K0 106 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 CUZD1Q86UP6 607 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 SLC34A3Q8N130 599 aa18.01■□□□□ 0.47
NME3-207ENST00000564628 ZNF655Q8N720 491 aaPredicted RBP18.01■□□□□ 0.47
NME3-207ENST00000564628 ATL1Q8WXF7 558 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms