RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 IDSB3KWA1 339 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 LCMT2O60294 686 aaKnown RBP18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 Q0VFX4 171 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 FAM53BQ14153 422 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 FAAH2Q6GMR7 532 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 ATCAYQ86WG3 371 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 EFCAB3Q8N7B9 438 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 ANKRD49Q8WVL7 239 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 THAP11Q96EK4 314 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 MKKSQ9NPJ1 570 aaPredicted RBP18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 SLAMF7Q9NQ25 335 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 NOVA2Q9UNW9 492 aaKnown RBP18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 MAP4K5Q9Y4K4 846 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 SHANK1Q9Y566 2161 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 FLNCQ14315 2725 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 EIF3HO15372 352 aaKnown RBP eCLIP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 IPO13O94829 963 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 HPP00738 406 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 IL1RNP18510 177 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 AVPR1BP47901 424 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 UQCRFS1P47985 274 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 EFNA3P52797 238 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 EMP2P54851 167 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 EEF1A2Q05639 463 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 TRADDQ15628 312 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 ATG9BQ674R7 924 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 TMEM214Q6NUQ4 689 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 ASPGQ86U10 573 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 NKAPQ8N5F7 415 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 MFSD9Q8NBP5 474 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 KCT2Q8NC54 265 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 ATL1Q8WXF7 558 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 VPS50Q96JG6 964 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 TSNARE1Q96NA8 513 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 ZNF160Q9HCG1 818 aa18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 UTP11Q9Y3A2 253 aaKnown RBP18.94■□□□□ 0.62
SHCBP1-203ENST00000564272 TCRBV9S1A1TA0A576 114 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 KLHL41O60662 606 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 HEXBP07686 556 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 COX6A1P12074 109 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 GRK3P35626 688 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 CCR8P51685 355 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 PLTPP55058 493 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 INPP5JQ15735 1006 aaPredicted RBP18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 PLEKHN1Q494U1 663 aaPredicted RBP18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 CATSPEREQ5SY80 951 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 IRAK1BP1Q5VVH5 260 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 IGFL3Q6UXB1 125 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 CAMKVQ8NCB2 501 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 ABHD11Q8NFV4 315 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 FBXO25Q8TCJ0 367 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 NEIL2Q969S2 332 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 TM4SF19Q96DZ7 209 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 THOC3Q96J01 351 aaKnown RBP18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 UNKQ9C0B0 810 aaKnown RBP18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 TGIF2Q9GZN2 237 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 LHPPQ9H008 270 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 SPNS1Q9H2V7 528 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 CAB39LQ9H9S4 337 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 GPAMQ9HCL2 828 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 HCN3Q9P1Z3 774 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 B3GNT3Q9Y2A9 372 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 CSAG2Q9Y5P2 127 aa18.93■□□□□ 0.62
SHCBP1-203ENST00000564272 SCN3AQ9NY46 2000 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 SGK494L7N484 410 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 JRKO75564 520 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 NSA2O95478 260 aaKnown RBP18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 GPX6P59796 221 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 AGAP7PQ5VUJ5 663 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 ZDHHC24Q6UX98 284 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 ZNF572Q7Z3I7 529 aaPredicted RBP18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 CCDC25Q86WR0 208 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 PDSS2Q86YH6 399 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 ZADH2Q8N4Q0 377 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 ZNF740Q8NDX6 193 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 SLC13A3Q8WWT9 602 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 SLC5A11Q8WWX8 675 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 TM9SF4Q92544 642 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 CDKL2Q92772 493 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 AGAP4Q96P64 663 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 RAB17Q9H0T7 212 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 POPDC3Q9HBV1 291 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 MAP10Q9P2G4 905 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 MKL2Q9ULH7 1088 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 RELNP78509 3460 aa18.92■□□□□ 0.62
SHCBP1-203ENST00000564272 NSG1A0A0A6YYJ2 146 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 TRBC2A0A5B9 178 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 FAM159BA6NKW6 160 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 H0YIG0 161 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 OR1F1O43749 312 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 VPS4BO75351 444 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 RDH16O75452 317 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 WISP3O95389 354 aaPredicted RBP18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 C1QAP02745 245 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 SLC35G6P0C7Q6 338 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 GNLYP22749 145 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 CXCR2P25025 360 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 SLC12A2P55011 1212 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms