RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RASSF9O75901 435 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 DCTN3O75935 186 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 KRT6AP02538 564 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 C9P02748 559 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 KRT6BP04259 564 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 GP1BAP07359 652 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 CEACAM1P13688 526 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 ALOX15P16050 662 aaPredicted RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 ACP1P24666 158 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 SERPINB3P29508 390 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 GRK3P35626 688 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 KRT6CP48668 564 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 PPM1FP49593 454 aaPredicted RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 PPP1CAP62136 330 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 REEP5Q00765 189 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 RELAQ04206 551 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 ZRSR2Q15696 482 aaKnown RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPG7-209ENST00000564047 SPRED3Q2MJR0 410 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 AMZ1Q400G9 498 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 C10orf62Q5T681 223 aaPredicted RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 NKAIN2Q5VXU1 208 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 IRGCQ6NXR0 463 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 WDR74Q6RFH5 385 aaPredicted RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 ADCK2Q7Z695 626 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 TRIM73Q86UV7 250 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 PLXDC1Q8IUK5 500 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 FAM20CQ8IXL6 584 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 LAS2Q8IYD9 372 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 CARFQ8N187 725 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 TWIST2Q8WVJ9 160 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 REPS1Q96D71 796 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 CDC6Q99741 560 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 CCT7Q99832 543 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 SARGQ9BW04 601 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 SEMA6CQ9H3T2 930 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 PFDN4Q9NQP4 134 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 C1GALT1Q9NS00 363 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 TSC22D4Q9Y3Q8 395 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 CELSR3Q9NYQ7 3312 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
SPG7-209ENST00000564047 ADAMTS20P59510 1910 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 MN1Q10571 1320 aaPredicted RBP12.38□□□□□ -0.43
SPG7-209ENST00000564047 TRBC2A0A5B9 178 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 SERTM1A2A2V5 107 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 TLCD2A6NGC4 264 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 TRPC5OSA6NMA1 111 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 MANBAO00462 879 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ZNF195O14628 629 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 FFAR3O14843 346 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 GPR42O15529 346 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 CBFA2T3O75081 653 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ULK1O75385 1050 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ATP5HO75947 161 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 MAGP20916 626 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 CDH3P22223 829 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 SERPINB1P30740 379 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 LSSP48449 732 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 INHBCP55103 352 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 MEF2AQ02078 507 aaPredicted RBP12.38□□□□□ -0.43
SPG7-209ENST00000564047 CFHR1Q03591 330 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 BNIP1Q12981 228 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 PDCD2Q16342 344 aaPredicted RBP12.38□□□□□ -0.43
SPG7-209ENST00000564047 FRG2Q64ET8 278 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 FCRL6Q6DN72 434 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 FIGLAQ6QHK4 219 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 TMIGD1Q6UXZ0 262 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 PACS2Q86VP3 889 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 PAQR7Q86WK9 346 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 WDR20Q8TBZ3 569 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 STON2Q8WXE9 905 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 USP7Q93009 1102 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 TGM7Q96PF1 710 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 FRG2BQ96QU4 278 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 DPYSL5Q9BPU6 564 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 LRRN3Q9H3W5 708 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ADGRE2Q9UHX3 823 aa12.38□□□□□ -0.43
SPG7-209ENST00000564047 ZNF490Q9ULM2 529 aaPredicted RBP12.38□□□□□ -0.43
SPG7-209ENST00000564047 COL5A1P20908 1838 aaPredicted RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 PIP5K1BO14986 540 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 SKAP2O75563 359 aaPredicted RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 UBOX5O94941 541 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 CPNE6O95741 557 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 RPLP0P05388 317 aaKnown RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 EZRP15311 586 aaKnown RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 CSRP1P21291 193 aaKnown RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 GSTM2P28161 218 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 CSF2RBP32927 897 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 HTR6P50406 440 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 AQP5P55064 265 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 GFERP55789 205 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 CCL7P80098 99 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms