RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 HCN3Q9P1Z3 774 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 PTGFRNQ9P2B2 879 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 NTNG1Q9Y2I2 539 aa16.77■□□□□ 0.28
NME3-205ENST00000563854 JRKO75564 520 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 SEC31AO94979 1220 aaKnown RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 CELA2AP08217 269 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 GP1BBP13224 206 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 FDXRP22570 491 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 CCND1P24385 295 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 GRK3P35626 688 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 BCL6P41182 706 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 MRPS25P82663 173 aaKnown RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 MEF2AQ02078 507 aaPredicted RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 PDIA2Q13087 525 aaKnown RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 FAM53BQ14153 422 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 ELOAQ14241 798 aaKnown RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 ZNF169Q14929 603 aaPredicted RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 MINDY4Q4G0A6 757 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 CAPN13Q6MZZ7 669 aaPredicted RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 ISLR2Q6UXK2 745 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 CAPN12Q6ZSI9 719 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 NDUFAF7Q7L592 441 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 ASPGQ86U10 573 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 SIRT6Q8N6T7 355 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 CAMKVQ8NCB2 501 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 BRIX1Q8TDN6 353 aaKnown RBP16.76■□□□□ 0.27
NME3-205ENST00000563854 SSC4DQ8WTU2 575 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 KRT12Q99456 494 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 VWA7Q9Y334 891 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 TEX264Q9Y6I9 313 aa16.76■□□□□ 0.27
NME3-205ENST00000563854 PRRC2CQ9Y520 2896 aaKnown RBP16.75■□□□□ 0.27
NME3-205ENST00000563854 IGHV1-45A0A0A0MS14 117 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 CCDC188H7C350 402 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 SGK494L7N484 410 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 KLHL18O94889 574 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 TSPAN12O95859 305 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 SERPIND1P05546 499 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 PRR35P0CG20 571 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 ARG2P78540 354 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 MFAP5Q13361 173 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
NME3-205ENST00000563854 STEAP4Q687X5 459 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 LCTLQ6UWM7 567 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 GALNT7Q86SF2 657 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 KCT2Q8NC54 265 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 FBXO36Q8NEA4 188 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 METTL21AQ8WXB1 218 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 PSMG3-AS1Q96PY0 264 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 HAUS8Q9BT25 410 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 SGPP1Q9BX95 441 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 RBCK1Q9BYM8 510 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 TGIF2Q9GZN2 237 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 AGPAT4Q9NRZ5 378 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 RIC8BQ9NVN3 520 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
NME3-205ENST00000563854 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 PSAT1Q9Y617 370 aa16.75■□□□□ 0.27
NME3-205ENST00000563854 DOCK10Q96BY6 2186 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 ANKUB1A6NFN9 424 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 ZNF860A6NHJ4 632 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 LCMT2O60294 686 aaKnown RBP16.74■□□□□ 0.27
NME3-205ENST00000563854 RDH16O75452 317 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 BMP10O95393 424 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 NSA2O95478 260 aaKnown RBP16.74■□□□□ 0.27
NME3-205ENST00000563854 F10P00742 488 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 SLC35G6P0C7Q6 338 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 RNF224P0DH78 156 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 C8orf89P0DMQ9 161 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 MGAT5Q09328 741 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 ZNF460Q14592 562 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 CRB2Q5IJ48 1285 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 DUPD1Q68J44 220 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 TMEM214Q6NUQ4 689 aaKnown RBP16.74■□□□□ 0.27
NME3-205ENST00000563854 IGFL2Q6UWQ7 119 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 STRA8Q7Z7C7 330 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 SLC26A11Q86WA9 606 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 SHISA5Q8N114 240 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 AMER2Q8N7J2 671 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 CATSPER1Q8NEC5 780 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 SLC13A3Q8WWT9 602 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 THAP11Q96EK4 314 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 TSNARE1Q96NA8 513 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 PLA2G3Q9NZ20 509 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 IKZF3Q9UKT9 509 aa16.74■□□□□ 0.27
NME3-205ENST00000563854 USP9XQ93008 2570 aaPredicted RBP16.74■□□□□ 0.27
NME3-205ENST00000563854 KCNE1BA0A087WTH5 132 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 IGHV3-20A0A0C4DH32 117 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 FAM95CA0A1B0GW59 222 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 A1L4Q6 167 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 NPEPPSL1A6NEC2 478 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 H0YIG0 161 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 NDUFS4O43181 175 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 OR1F1O43749 312 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 WFS1O76024 890 aa16.73■□□□□ 0.27
NME3-205ENST00000563854 SEC24DO94855 1032 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms