RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 BCORP1Q8N888 145 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 FBXO15Q8NCQ5 510 aaPredicted RBP6.53□□□□□ -1.36
CDH11-208ENST00000563492 ZNF740Q8NDX6 193 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 MCUQ8NE86 351 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 TRIM58Q8NG06 486 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 OR5T3Q8NGG3 340 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 OR51Q1Q8NH59 317 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 ZCCHC10Q8TBK6 192 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 KCNJ9Q92806 393 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 RERGQ96A58 199 aaPredicted RBP6.53□□□□□ -1.36
CDH11-208ENST00000563492 PYCR2Q96C36 320 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 NPAS2Q99743 824 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 AARSD1Q9BTE6 412 aaKnown RBP6.53□□□□□ -1.36
CDH11-208ENST00000563492 UNKQ9C0B0 810 aaKnown RBP6.53□□□□□ -1.36
CDH11-208ENST00000563492 TGIF2Q9GZN2 237 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH11-208ENST00000563492 MKKSQ9NPJ1 570 aaPredicted RBP6.53□□□□□ -1.36
CDH11-208ENST00000563492 FAM114A2Q9NRY5 505 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 ANKRD10Q9NXR5 420 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 STMN3Q9NZ72 180 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 SAMD15Q9P1V8 674 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 SH3BGRL2Q9UJC5 107 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 MRFAP1Q9Y605 127 aa6.53□□□□□ -1.36
CDH11-208ENST00000563492 CSMD1Q96PZ7 3565 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 ABCA12Q86UK0 2595 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 KCNE1BA0A087WTH5 132 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TRAV17A0A0B4J275 112 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 MAGEB16A2A368 324 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 DYTNA2CJ06 578 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 PFDN6O15212 129 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 CDC123O75794 336 aaPredicted RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 UNC5CO95185 931 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TSPAN12O95859 305 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 AHSGP02765 367 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 UQCRHP07919 91 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 C8orf89P0DMQ9 161 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 CDH1P12830 882 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 MLNP12872 115 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 NPPBP16860 134 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 HSD17B2P37059 387 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 XCR1P46094 333 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 OLR1P78380 273 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 ABATP80404 500 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 SARNPP82979 210 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 RELAQ04206 551 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 FAM53BQ14153 422 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 CDSNQ15517 529 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 CYP1B1Q16678 543 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 BTBD16Q32M84 506 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TTLL9Q3SXZ7 439 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 CATSPEREQ5SY80 951 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 GARNL3Q5VVW2 1013 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 SPINK14Q6IE38 97 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TMEM214Q6NUQ4 689 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 RPUSD3Q6P087 351 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 AGTRAPQ6RW13 159 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 GFRALQ6UXV0 394 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 NCCRP1Q6ZVX7 275 aaPredicted RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 CPEB2Q7Z5Q1 589 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 ANKRD37Q7Z713 158 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 BEST3Q8N1M1 668 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 NR4A3Q92570 626 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TSLPQ969D9 159 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 RELTQ969Z4 430 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TM4SF19Q96DZ7 209 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 MVB12AQ96EY5 273 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 PEX11GQ96HA9 241 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 OR4K3Q96R72 315 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 WDR83Q9BRX9 315 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 TSPAN10Q9H1Z9 355 aaPredicted RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 CCDC68Q9H2F9 335 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 SPNS1Q9H2V7 528 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 XAB2Q9HCS7 855 aaKnown RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 CCDC177Q9NQR7 707 aaPredicted RBP6.52□□□□□ -1.37
CDH11-208ENST00000563492 KLHL1Q9NR64 748 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 LANCL2Q9NS86 450 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 HOMER3Q9NSC5 361 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TMEM184CQ9NVA4 438 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 C14orf105Q9NVL8 296 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 RIC8BQ9NVN3 520 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
CDH11-208ENST00000563492 TRGV8A0A0C4DH27 118 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 OR5H15A6NDH6 313 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 GOLGA6L6A8MZA4 724 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 PRSS44E7EML9 344 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 FAM227AF5H4B4 570 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 PRPF4O43172 522 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH11-208ENST00000563492 PRAMEF2O60811 474 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 PHF2O75151 1096 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 CCNDBP1O95273 360 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 NSA2O95478 260 aaKnown RBP6.51□□□□□ -1.37
CDH11-208ENST00000563492 SNRPB2P08579 225 aaKnown RBP6.51□□□□□ -1.37
CDH11-208ENST00000563492 ENO3P13929 434 aaPredicted RBP6.51□□□□□ -1.37
CDH11-208ENST00000563492 CD96P40200 585 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 HNF4AP41235 474 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 AVPR1BP47901 424 aa6.51□□□□□ -1.37
CDH11-208ENST00000563492 DHX9Q08211 1270 aaKnown RBP6.51□□□□□ -1.37
CDH11-208ENST00000563492 CRYMQ14894 314 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms